Cow genome map


           Conread name:
           Ova1-OVRM10196B05
        

               Conread position:
               7-177
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               7-613
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 539
               

               Conread position:
               7-620
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 309
               

               Conread position:
               7-633
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 278
               

               Conread position:
               7-673
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 98
               

               Conread position:
               7-689
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 340
               

               Conread position:
               7-694
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 127
               

               Conread position:
               7-710
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 98
               

               Conread position:
               7-731
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 168
               

               Conread position:
               7-732
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 163
               

               Conread position:
               8-653
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 196
               

               Conread position:
               9-473
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 416
               

               Conread position:
               9-615
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 531
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 532
               

               Conread position:
               9-632
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 402
               

               Conread position:
               9-686
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 64
               

               Conread position:
               35-627
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 112
               

               Conread position:
               39-666
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 124
               

               Conread position:
               41-627
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               41-632
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 380
               

               Conread position:
               42-627
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 152
               

               Conread position:
               42-632
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 160
               

               Conread position:
               45-481
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 156
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 317
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 157
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 374
               

               Conread position:
               45-629
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 373
               

               Conread position:
               45-633
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               45-667
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 375
               

               Conread position:
               45-668
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 383
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 371
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 23
               

               Conread position:
               47-336
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               44, 103
               

               Conread position:
               47-525
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 63
               

               Conread position:
               47-610
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 155
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 368
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 368
               

               Conread position:
               47-627
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 318
               

               Conread position:
               48-627
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 372
               

               Conread position:
               49-353
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               187, 41
               

               Conread position:
               50-348
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               48, 93
               

               Conread position:
               50-569
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 365
               

               Conread position:
               71-454
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 339
               

               Conread position:
               89-613
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               90-384
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 14
               

               Conread position:
               90-469
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               90-530
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 173
               

               Conread position:
               90-535
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 63
               

               Conread position:
               95-613
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 203
               

               Conread position:
               95-613
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 30
               

               Conread position:
               95-632
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 95
               

               Conread position:
               95-702
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               109-700
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               411
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               125-569
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               128-569
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 235
               

               Conread position:
               145-646
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 263
               

               Conread position:
               153-488
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               218-569
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 182
               

               Conread position:
               224-605
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 21
               

               Conread position:
               230-710
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               333
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               6, 171
               

               Conread position:
               237-627
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 171
               

               Conread position:
               252-613
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 153
               

               Conread position:
               252-651
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               299-607
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               299-607
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 105
               

               Conread position:
               305-614
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 99
               

               Conread position:
               308-613
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               38, 10
               

               Conread position:
               318-613
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               335-641
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               350-686
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               402-651
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               461-632
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 49
               

               Conread position:
               461-722
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 32
               

               Conread position:
               568-710
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 105
               

               Conread position:
               568-720
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 50
               

               Conread position:
               568-723
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 0
               
Show alignments to all cow chromosomes.