Cow genome map
| Conread name: | Ova1-OVRM10196B05 |
| Conread position: | 1-614 |
| Cow position: | chr4:47718268-47717629 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 1-646 |
| Cow position: | chr4:32211493-32212179 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 417 |
| Conread position: | 5-723 |
| Cow position: | chr4:8598804-8598069 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 165 |
| Conread position: | 7-252 |
| Cow position: | chr4:21358995-21359234 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 7-613 |
| Cow position: | chr4:66925336-66925974 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 157 |
| Conread position: | 7-668 |
| Cow position: | chr4:51044549-51043898 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 64 |
| Conread position: | 7-703 |
| Cow position: | chr4:1464588-1463866 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 190 |
| Conread position: | 7-722 |
| Cow position: | chr4:21338650-21337919 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 8-670 |
| Cow position: | chr4:40824919-40824218 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 392 |
| Conread position: | 8-693 |
| Cow position: | chr4:34185517-34184830 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 9-613 |
| Cow position: | chr4:3960927-3961568 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 196 |
| Conread position: | 9-613 |
| Cow position: | chr4:17926923-17926278 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 216 |
| Conread position: | 9-625 |
| Cow position: | chr4:24445868-24445217 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 154 |
| Conread position: | 9-627 |
| Cow position: | chr4:43880441-43881100 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 414 |
| Conread position: | 9-632 |
| Cow position: | chr4:33493142-33493822 (view UCSC Genome Browser custom track) |
| Alignm length: | 685 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 406 |
| Conread position: | 9-654 |
| Cow position: | chr4:16359224-16359902 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 141 |
| Conread position: | 13-534 |
| Cow position: | chr4:6215213-6214672 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 15-613 |
| Cow position: | chr4:157865-158492 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 15-613 |
| Cow position: | chr4:3125118-3125772 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 405 |
| Conread position: | 15-614 |
| Cow position: | chr4:528330-528960 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 406 |
| Conread position: | 15-651 |
| Cow position: | chr4:101592-100917 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 414 |
| Conread position: | 15-651 |
| Cow position: | chr4:6269284-6268615 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 402 |
| Conread position: | 32-569 |
| Cow position: | chr4:3829850-3830397 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 153 |
| Conread position: | 33-666 |
| Cow position: | chr4:4175806-4176453 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 35-710 |
| Cow position: | chr4:11393971-11393269 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 134 |
| Conread position: | 37-518 |
| Cow position: | chr4:60673279-60673735 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 34 |
| Conread position: | 45-344 |
| Cow position: | chr4:23114797-23114490 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 45-609 |
| Cow position: | chr4:29532343-29531753 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 372 |
| Conread position: | 45-613 |
| Cow position: | chr4:25600229-25599642 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 56 |
| Conread position: | 45-627 |
| Cow position: | chr4:355286-355901 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 45-627 |
| Cow position: | chr4:6490975-6490373 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 329 |
| Conread position: | 45-627 |
| Cow position: | chr4:18516267-18516888 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 394 |
| Conread position: | 45-627 |
| Cow position: | chr4:43320265-43319655 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 375 |
| Conread position: | 45-648 |
| Cow position: | chr4:13491947-13492588 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 375 |
| Conread position: | 45-686 |
| Cow position: | chr4:48025773-48026445 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 213 |
| Conread position: | 46-254 |
| Cow position: | chr4:60265415-60265194 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 46-454 |
| Cow position: | chr4:31668689-31669116 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 376 |
| Conread position: | 46-627 |
| Cow position: | chr4:36895746-36896359 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 357 |
| Conread position: | 46-627 |
| Cow position: | chr4:41330812-41331430 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 371 |
| Conread position: | 46-627 |
| Cow position: | chr4:45049923-45049307 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 148 |
| Conread position: | 46-633 |
| Cow position: | chr4:12241848-12241219 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 375 |
| Conread position: | 46-633 |
| Cow position: | chr4:44724455-44725081 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 374 |
| Conread position: | 47-279 |
| Cow position: | chr4:9311610-9311854 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 47-295 |
| Cow position: | chr4:6449506-6449254 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 47-613 |
| Cow position: | chr4:602370-602970 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 47-613 |
| Cow position: | chr4:5879558-5880142 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 134 |
| Conread position: | 47-613 |
| Cow position: | chr4:13547401-13548006 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 371 |
| Conread position: | 47-613 |
| Cow position: | chr4:30308061-30307482 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 40 |
| Conread position: | 47-613 |
| Cow position: | chr4:47764797-47764194 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 370 |
| Conread position: | 47-632 |
| Cow position: | chr4:1931247-1930627 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 220 |
| Conread position: | 47-700 |
| Cow position: | chr4:17531034-17530366 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 83 |
| Conread position: | 47-722 |
| Cow position: | chr4:28830414-28831110 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 48-569 |
| Cow position: | chr4:4905527-4906068 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 365 |
| Conread position: | 50-722 |
| Cow position: | chr4:46663580-46664275 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 210 |
| Conread position: | 75-651 |
| Cow position: | chr4:65224125-65223517 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 90-616 |
| Cow position: | chr4:18425093-18424545 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 104 |
| Conread position: | 91-629 |
| Cow position: | chr4:496513-495974 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 99 |
| Conread position: | 95-661 |
| Cow position: | chr4:39272509-39271921 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 96-616 |
| Cow position: | chr4:1497319-1496791 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 97-632 |
| Cow position: | chr4:66179554-66178992 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 122-613 |
| Cow position: | chr4:16056063-16056578 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 72 |
| Conread position: | 127-380 |
| Cow position: | chr4:12608040-12607789 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 129-551 |
| Cow position: | chr4:969577-969141 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 34, 278 |
| Conread position: | 138-632 |
| Cow position: | chr4:27332926-27333432 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 42 |
| Conread position: | 153-632 |
| Cow position: | chr4:26887356-26886868 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 193 |
| Conread position: | 163-532 |
| Cow position: | chr4:24198699-24198329 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 168 |
| Conread position: | 164-699 |
| Cow position: | chr4:15263484-15262939 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 179-627 |
| Cow position: | chr4:33073580-33073118 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 179-627 |
| Cow position: | chr4:57979148-57979619 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 12 |
| Conread position: | 184-710 |
| Cow position: | chr4:21564670-21565172 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 28 |
| Conread position: | 188-613 |
| Cow position: | chr4:11618386-11618827 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 72 |
| Conread position: | 192-569 |
| Cow position: | chr4:62565516-62565900 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 6, 330 |
| Conread position: | 239-722 |
| Cow position: | chr4:60264983-60264480 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 161 |
| Conread position: | 250-613 |
| Cow position: | chr4:41119600-41119990 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 154 |
| Conread position: | 280-724 |
| Cow position: | chr4:23493368-23493808 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 345-627 |
| Cow position: | chr4:12586995-12587290 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 61 |
| Conread position: | 353-610 |
| Cow position: | chr4:9355066-9354797 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 353-613 |
| Cow position: | chr4:61256601-61256868 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 41 |
| Conread position: | 398-560 |
| Cow position: | chr4:27443203-27443370 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 404-651 |
| Cow position: | chr4:9587018-9587280 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 415-654 |
| Cow position: | chr4:26749114-26748879 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 161, 50 |
| Conread position: | 415-701 |
| Cow position: | chr4:11384726-11385022 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 419-725 |
| Cow position: | chr4:60630614-60630313 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 605-722 |
| Cow position: | chr4:54955717-54955838 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.