Cow genome map


           Conread name:
           Ova1-OVRM10196B05
        

               Conread position:
               1-614
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               1-646
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 417
               

               Conread position:
               5-723
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 165
               

               Conread position:
               7-252
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               7-613
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 157
               

               Conread position:
               7-668
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               7-703
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 190
               

               Conread position:
               7-722
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               8-670
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 392
               

               Conread position:
               8-693
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               9-613
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 196
               

               Conread position:
               9-613
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 216
               

               Conread position:
               9-625
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 154
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 414
               

               Conread position:
               9-632
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 406
               

               Conread position:
               9-654
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 141
               

               Conread position:
               13-534
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               15-613
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 90
               

               Conread position:
               15-613
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 405
               

               Conread position:
               15-614
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 406
               

               Conread position:
               15-651
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 414
               

               Conread position:
               15-651
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 402
               

               Conread position:
               32-569
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 153
               

               Conread position:
               33-666
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 58
               

               Conread position:
               35-710
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 134
               

               Conread position:
               37-518
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 34
               

               Conread position:
               45-344
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               45-609
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 372
               

               Conread position:
               45-613
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 56
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 329
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 394
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 375
               

               Conread position:
               45-648
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 375
               

               Conread position:
               45-686
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 213
               

               Conread position:
               46-254
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               46-454
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 376
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 357
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 371
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 148
               

               Conread position:
               46-633
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 375
               

               Conread position:
               46-633
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 374
               

               Conread position:
               47-279
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               47-295
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 98
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 155
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 134
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 371
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 40
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 370
               

               Conread position:
               47-632
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 220
               

               Conread position:
               47-700
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 83
               

               Conread position:
               47-722
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               48-569
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 365
               

               Conread position:
               50-722
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 210
               

               Conread position:
               75-651
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               90-616
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 104
               

               Conread position:
               91-629
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 99
               

               Conread position:
               95-661
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 18
               

               Conread position:
               96-616
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 63
               

               Conread position:
               97-632
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               122-613
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               127-380
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               129-551
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               34, 278
               

               Conread position:
               138-632
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 42
               

               Conread position:
               153-632
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 193
               

               Conread position:
               163-532
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 168
               

               Conread position:
               164-699
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               179-627
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 14
               

               Conread position:
               179-627
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 12
               

               Conread position:
               184-710
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 28
               

               Conread position:
               188-613
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               192-569
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               6, 330
               

               Conread position:
               239-722
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 161
               

               Conread position:
               250-613
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 154
               

               Conread position:
               280-724
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               345-627
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 61
               

               Conread position:
               353-610
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               353-613
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               398-560
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               15, 117
               

               Conread position:
               404-651
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               415-654
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               161, 50
               

               Conread position:
               415-701
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               44, 95
               

               Conread position:
               419-725
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               128, 45
               

               Conread position:
               605-722
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 0
               
Show alignments to all cow chromosomes.