Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 1-569
Cow position:
Alignm length: 591
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 195

Conread position: 1-615
Cow position:
Alignm length: 642
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 399

Conread position: 1-723
Cow position:
Alignm length: 751
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 65

Conread position: 4-569
Cow position:
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 289

Conread position: 7-195
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 7-240
Cow position:
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 7-258
Cow position:
Alignm length: 258
Alignm identity: 189
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 44, 57

Conread position: 7-274
Cow position:
Alignm length: 285
Alignm identity: 207
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 42, 259

Conread position: 7-324
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 147

Conread position: 7-346
Cow position:
Alignm length: 359
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 42, 128

Conread position: 7-356
Cow position:
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 106

Conread position: 7-452
Cow position:
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 92

Conread position: 7-609
Cow position:
Alignm length: 642
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 334

Conread position: 7-611
Cow position:
Alignm length: 635
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 121

Conread position: 7-613
Cow position:
Alignm length: 647
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 410

Conread position: 7-613
Cow position:
Alignm length: 636
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 304

Conread position: 7-616
Cow position:
Alignm length: 645
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 353

Conread position: 7-616
Cow position:
Alignm length: 652
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 462

Conread position: 7-647
Cow position:
Alignm length: 679
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 98

Conread position: 7-654
Cow position:
Alignm length: 692
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 147

Conread position: 7-693
Cow position:
Alignm length: 725
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 268

Conread position: 7-702
Cow position:
Alignm length: 735
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 191

Conread position: 7-710
Cow position:
Alignm length: 736
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 269

Conread position: 8-613
Cow position:
Alignm length: 640
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 189

Conread position: 8-616
Cow position:
Alignm length: 648
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 528

Conread position: 8-722
Cow position:
Alignm length: 763
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 55

Conread position: 8-732
Cow position:
Alignm length: 742
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 9-569
Cow position:
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 417

Conread position: 9-613
Cow position:
Alignm length: 648
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 197

Conread position: 9-626
Cow position:
Alignm length: 650
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 130

Conread position: 9-630
Cow position:
Alignm length: 666
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 156

Conread position: 9-638
Cow position:
Alignm length: 674
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 408

Conread position: 9-661
Cow position:
Alignm length: 696
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 395

Conread position: 9-686
Cow position:
Alignm length: 723
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 415

Conread position: 10-278
Cow position:
Alignm length: 276
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 61

Conread position: 10-627
Cow position:
Alignm length: 659
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 410

Conread position: 13-356
Cow position:
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 74

Conread position: 13-699
Cow position:
Alignm length: 725
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 310

Conread position: 14-651
Cow position:
Alignm length: 684
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 407

Conread position: 25-652
Cow position:
Alignm length: 667
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 23

Conread position: 29-369
Cow position:
Alignm length: 356
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 179

Conread position: 35-489
Cow position:
Alignm length: 478
Alignm identity: 315
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 112

Conread position: 39-346
Cow position:
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 179

Conread position: 41-613
Cow position:
Alignm length: 613
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 7

Conread position: 41-613
Cow position:
Alignm length: 611
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 42-268
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 45-569
Cow position:
Alignm length: 545
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 374

Conread position: 45-613
Cow position:
Alignm length: 608
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 158

Conread position: 45-627
Cow position:
Alignm length: 623
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 375

Conread position: 45-627
Cow position:
Alignm length: 605
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 157

Conread position: 45-627
Cow position:
Alignm length: 625
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 376

Conread position: 45-627
Cow position:
Alignm length: 612
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 157

Conread position: 45-668
Cow position:
Alignm length: 665
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 375

Conread position: 46-457
Cow position:
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 97

Conread position: 46-627
Cow position:
Alignm length: 620
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 155

Conread position: 46-627
Cow position:
Alignm length: 621
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 211

Conread position: 46-627
Cow position:
Alignm length: 624
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 371

Conread position: 46-627
Cow position:
Alignm length: 625
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 379

Conread position: 47-386
Cow position:
Alignm length: 356
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 311

Conread position: 47-447
Cow position:
Alignm length: 428
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 364

Conread position: 47-504
Cow position:
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 364

Conread position: 47-613
Cow position:
Alignm length: 600
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 363

Conread position: 47-613
Cow position:
Alignm length: 588
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 47-613
Cow position:
Alignm length: 595
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 164

Conread position: 47-613
Cow position:
Alignm length: 594
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 58

Conread position: 47-613
Cow position:
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 362

Conread position: 47-614
Cow position:
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 490

Conread position: 47-627
Cow position:
Alignm length: 620
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 153

Conread position: 47-632
Cow position:
Alignm length: 623
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 134

Conread position: 47-633
Cow position:
Alignm length: 630
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 364

Conread position: 47-638
Cow position:
Alignm length: 628
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 132

Conread position: 47-661
Cow position:
Alignm length: 646
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 47-670
Cow position:
Alignm length: 657
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 336

Conread position: 47-702
Cow position:
Alignm length: 686
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 50-435
Cow position:
Alignm length: 401
Alignm identity: 275
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 32, 38

Conread position: 50-613
Cow position:
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 239

Conread position: 50-666
Cow position:
Alignm length: 655
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 365

Conread position: 53-673
Cow position:
Alignm length: 663
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 222

Conread position: 69-530
Cow position:
Alignm length: 481
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 7

Conread position: 72-319
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 21

Conread position: 72-610
Cow position:
Alignm length: 572
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 21

Conread position: 75-610
Cow position:
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 89-353
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 91, 15

Conread position: 89-454
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 89-488
Cow position:
Alignm length: 415
Alignm identity: 279
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 113, 19

Conread position: 89-613
Cow position:
Alignm length: 554
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 105

Conread position: 89-722
Cow position:
Alignm length: 666
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 12

Conread position: 90-610
Cow position:
Alignm length: 555
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 314

Conread position: 90-613
Cow position:
Alignm length: 555
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 312

Conread position: 94-531
Cow position:
Alignm length: 460
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 11

Conread position: 95-610
Cow position:
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 313

Conread position: 95-614
Cow position:
Alignm length: 562
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 37

Conread position: 95-706
Cow position:
Alignm length: 644
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 232

Conread position: 130-627
Cow position:
Alignm length: 527
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 64

Conread position: 181-652
Cow position:
Alignm length: 504
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 12

Conread position: 191-666
Cow position:
Alignm length: 505
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 85

Conread position: 192-613
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 67

Conread position: 212-710
Cow position:
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 319

Conread position: 224-702
Cow position:
Alignm length: 501
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 181

Conread position: 230-569
Cow position:
Alignm length: 348
Alignm identity: 235
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 32

Conread position: 248-561
Cow position:
Alignm length: 331
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 33, 151

Conread position: 261-551
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 131

Conread position: 284-508
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 68, 34

Conread position: 288-556
Cow position:
Alignm length: 277
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 234

Conread position: 327-714
Cow position:
Alignm length: 409
Alignm identity: 265
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 55, 20

Conread position: 329-710
Cow position:
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 30

Conread position: 330-626
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 65, 9

Conread position: 333-568
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 63

Conread position: 334-506
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 76, 51

Conread position: 340-706
Cow position:
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 23

Conread position: 345-722
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 49

Conread position: 347-627
Cow position:
Alignm length: 296
Alignm identity: 182
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 164

Conread position: 367-710
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 403-619
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 78

Conread position: 412-569
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 99

Conread position: 441-613
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 70

Conread position: 442-668
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 70

Conread position: 460-723
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 49

Conread position: 468-710
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 42

Conread position: 498-723
Cow position:
Alignm length: 243
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 10

Conread position: 498-723
Cow position:
Alignm length: 243
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 10

Conread position: 511-711
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 116

Conread position: 570-702
Cow position:
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 5

Show alignments to all cow chromosomes.