Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 1-686
Cow position:
Alignm length: 726
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 419

Conread position: 4-611
Cow position:
Alignm length: 642
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 154

Conread position: 5-482
Cow position:
Alignm length: 508
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 165

Conread position: 5-722
Cow position:
Alignm length: 768
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 127

Conread position: 7-353
Cow position:
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 58

Conread position: 7-354
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 31, 206

Conread position: 7-465
Cow position:
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 83

Conread position: 7-474
Cow position:
Alignm length: 483
Alignm identity: 319
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 83

Conread position: 7-488
Cow position:
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 144

Conread position: 7-568
Cow position:
Alignm length: 591
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 198

Conread position: 7-611
Cow position:
Alignm length: 644
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 28

Conread position: 7-667
Cow position:
Alignm length: 695
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 179

Conread position: 7-689
Cow position:
Alignm length: 722
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 501

Conread position: 7-690
Cow position:
Alignm length: 719
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 183

Conread position: 7-691
Cow position:
Alignm length: 730
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 417

Conread position: 7-710
Cow position:
Alignm length: 742
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 83

Conread position: 7-710
Cow position:
Alignm length: 759
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 260

Conread position: 7-715
Cow position:
Alignm length: 728
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 20

Conread position: 7-723
Cow position:
Alignm length: 757
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 222

Conread position: 7-723
Cow position:
Alignm length: 736
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 8-345
Cow position:
Alignm length: 355
Alignm identity: 248
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 42, 249

Conread position: 8-568
Cow position:
Alignm length: 575
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 49

Conread position: 8-613
Cow position:
Alignm length: 652
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 142

Conread position: 9-569
Cow position:
Alignm length: 604
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 196

Conread position: 9-627
Cow position:
Alignm length: 661
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 402

Conread position: 9-627
Cow position:
Alignm length: 666
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 395

Conread position: 9-686
Cow position:
Alignm length: 719
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 96

Conread position: 13-454
Cow position:
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 89

Conread position: 13-466
Cow position:
Alignm length: 488
Alignm identity: 322
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 15-336
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 33, 0

Conread position: 15-613
Cow position:
Alignm length: 643
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 192

Conread position: 15-632
Cow position:
Alignm length: 663
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 188

Conread position: 20-627
Cow position:
Alignm length: 645
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 183

Conread position: 25-389
Cow position:
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 74

Conread position: 28-314
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 121

Conread position: 28-651
Cow position:
Alignm length: 666
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 11

Conread position: 32-495
Cow position:
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 54

Conread position: 39-344
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 62, 291

Conread position: 41-686
Cow position:
Alignm length: 687
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 379

Conread position: 43-351
Cow position:
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 45-351
Cow position:
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 158

Conread position: 45-400
Cow position:
Alignm length: 377
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 154

Conread position: 45-604
Cow position:
Alignm length: 594
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 353

Conread position: 45-623
Cow position:
Alignm length: 616
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 376

Conread position: 45-627
Cow position:
Alignm length: 630
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 236

Conread position: 45-627
Cow position:
Alignm length: 624
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 45-627
Cow position:
Alignm length: 620
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 157

Conread position: 45-730
Cow position:
Alignm length: 717
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 236

Conread position: 46-199
Cow position:
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 46-344
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 156

Conread position: 46-603
Cow position:
Alignm length: 594
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 125

Conread position: 46-623
Cow position:
Alignm length: 636
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 391

Conread position: 46-627
Cow position:
Alignm length: 623
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 374

Conread position: 46-627
Cow position:
Alignm length: 631
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 381

Conread position: 46-627
Cow position:
Alignm length: 617
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 366

Conread position: 46-627
Cow position:
Alignm length: 614
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 215

Conread position: 46-627
Cow position:
Alignm length: 622
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 372

Conread position: 46-631
Cow position:
Alignm length: 622
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 158

Conread position: 46-665
Cow position:
Alignm length: 662
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 629

Conread position: 46-665
Cow position:
Alignm length: 658
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 338

Conread position: 46-686
Cow position:
Alignm length: 681
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 151

Conread position: 47-318
Cow position:
Alignm length: 285
Alignm identity: 196
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 40, 180

Conread position: 47-318
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 0

Conread position: 47-348
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 43

Conread position: 47-349
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 47-378
Cow position:
Alignm length: 348
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 47-388
Cow position:
Alignm length: 357
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 287

Conread position: 47-417
Cow position:
Alignm length: 391
Alignm identity: 266
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 140

Conread position: 47-567
Cow position:
Alignm length: 550
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 370

Conread position: 47-608
Cow position:
Alignm length: 590
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 139

Conread position: 47-610
Cow position:
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 47-613
Cow position:
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 176

Conread position: 47-613
Cow position:
Alignm length: 607
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 364

Conread position: 47-613
Cow position:
Alignm length: 599
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 374

Conread position: 47-613
Cow position:
Alignm length: 599
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 358

Conread position: 47-613
Cow position:
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 266

Conread position: 47-613
Cow position:
Alignm length: 605
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 181

Conread position: 47-613
Cow position:
Alignm length: 616
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 499

Conread position: 47-616
Cow position:
Alignm length: 603
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 363

Conread position: 47-651
Cow position:
Alignm length: 651
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 183

Conread position: 47-703
Cow position:
Alignm length: 698
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 24

Conread position: 48-627
Cow position:
Alignm length: 625
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 376

Conread position: 50-339
Cow position:
Alignm length: 301
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 139

Conread position: 50-541
Cow position:
Alignm length: 506
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 133

Conread position: 50-613
Cow position:
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 366

Conread position: 50-632
Cow position:
Alignm length: 618
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 152

Conread position: 52-613
Cow position:
Alignm length: 592
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 135

Conread position: 79-722
Cow position:
Alignm length: 680
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 29

Conread position: 90-613
Cow position:
Alignm length: 553
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 316

Conread position: 90-613
Cow position:
Alignm length: 554
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 104

Conread position: 90-613
Cow position:
Alignm length: 557
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 323

Conread position: 91-666
Cow position:
Alignm length: 603
Alignm identity: 389
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 13, 54

Conread position: 95-613
Cow position:
Alignm length: 551
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 301

Conread position: 95-665
Cow position:
Alignm length: 610
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 98-472
Cow position:
Alignm length: 395
Alignm identity: 269
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 132

Conread position: 105-570
Cow position:
Alignm length: 483
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 294

Conread position: 111-609
Cow position:
Alignm length: 534
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 422

Conread position: 123-723
Cow position:
Alignm length: 636
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 283

Conread position: 124-454
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 111, 56

Conread position: 124-569
Cow position:
Alignm length: 455
Alignm identity: 291
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 38

Conread position: 137-632
Cow position:
Alignm length: 518
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 153-361
Cow position:
Alignm length: 214
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 83, 31

Conread position: 157-645
Cow position:
Alignm length: 526
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 23

Conread position: 175-611
Cow position:
Alignm length: 466
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 264

Conread position: 176-635
Cow position:
Alignm length: 490
Alignm identity: 315
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 161

Conread position: 180-651
Cow position:
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 13

Conread position: 181-710
Cow position:
Alignm length: 561
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 121

Conread position: 186-613
Cow position:
Alignm length: 450
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 171

Conread position: 187-613
Cow position:
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 222

Conread position: 211-732
Cow position:
Alignm length: 549
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 40

Conread position: 212-569
Cow position:
Alignm length: 372
Alignm identity: 243
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 90

Conread position: 227-569
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 43

Conread position: 237-611
Cow position:
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 38

Conread position: 284-616
Cow position:
Alignm length: 355
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 115

Conread position: 289-651
Cow position:
Alignm length: 381
Alignm identity: 263
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 67, 33

Conread position: 324-651
Cow position:
Alignm length: 344
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 89, 78

Conread position: 325-531
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 14

Conread position: 329-613
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 85

Conread position: 350-629
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 53

Conread position: 353-613
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 60, 38

Conread position: 385-682
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 17, 56

Conread position: 412-613
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 56, 100

Conread position: 465-722
Cow position:
Alignm length: 269
Alignm identity: 199
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 104, 18

Conread position: 479-722
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 31

Show alignments to all cow chromosomes.