Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 2-564
Cow position:
Alignm length: 584
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 141

Conread position: 5-632
Cow position:
Alignm length: 667
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 200

Conread position: 5-727
Cow position:
Alignm length: 773
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 187

Conread position: 7-169
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 7-220
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 77

Conread position: 7-470
Cow position:
Alignm length: 485
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 7-472
Cow position:
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 346

Conread position: 7-569
Cow position:
Alignm length: 598
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 155

Conread position: 7-611
Cow position:
Alignm length: 648
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 415

Conread position: 7-613
Cow position:
Alignm length: 649
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 42

Conread position: 7-624
Cow position:
Alignm length: 639
Alignm identity: 396
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 85, 454

Conread position: 7-649
Cow position:
Alignm length: 686
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 128

Conread position: 7-656
Cow position:
Alignm length: 689
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 60

Conread position: 7-704
Cow position:
Alignm length: 729
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 333

Conread position: 7-718
Cow position:
Alignm length: 762
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 192

Conread position: 8-197
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 137

Conread position: 8-353
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 96

Conread position: 9-569
Cow position:
Alignm length: 587
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 115

Conread position: 9-569
Cow position:
Alignm length: 594
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 225

Conread position: 9-610
Cow position:
Alignm length: 643
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 181

Conread position: 9-611
Cow position:
Alignm length: 648
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 416

Conread position: 9-627
Cow position:
Alignm length: 668
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 9-627
Cow position:
Alignm length: 659
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 411

Conread position: 9-732
Cow position:
Alignm length: 773
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 166

Conread position: 10-616
Cow position:
Alignm length: 637
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 189

Conread position: 13-723
Cow position:
Alignm length: 746
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 520

Conread position: 15-613
Cow position:
Alignm length: 635
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 212

Conread position: 15-651
Cow position:
Alignm length: 681
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 404

Conread position: 21-651
Cow position:
Alignm length: 659
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 130

Conread position: 32-691
Cow position:
Alignm length: 698
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 91

Conread position: 34-249
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 137

Conread position: 34-711
Cow position:
Alignm length: 706
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 15

Conread position: 34-722
Cow position:
Alignm length: 725
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 71

Conread position: 41-651
Cow position:
Alignm length: 638
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 7

Conread position: 43-506
Cow position:
Alignm length: 495
Alignm identity: 332
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 121

Conread position: 43-627
Cow position:
Alignm length: 624
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 159

Conread position: 45-276
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 188

Conread position: 45-327
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 143

Conread position: 45-417
Cow position:
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 370

Conread position: 45-569
Cow position:
Alignm length: 549
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 56

Conread position: 45-613
Cow position:
Alignm length: 608
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 370

Conread position: 45-613
Cow position:
Alignm length: 610
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 376

Conread position: 45-627
Cow position:
Alignm length: 619
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 56

Conread position: 45-627
Cow position:
Alignm length: 617
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 368

Conread position: 45-627
Cow position:
Alignm length: 619
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 370

Conread position: 45-627
Cow position:
Alignm length: 624
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 105

Conread position: 45-627
Cow position:
Alignm length: 630
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 45-627
Cow position:
Alignm length: 621
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 277

Conread position: 45-627
Cow position:
Alignm length: 623
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 374

Conread position: 45-638
Cow position:
Alignm length: 635
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 374

Conread position: 45-686
Cow position:
Alignm length: 673
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 157

Conread position: 46-263
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 46-514
Cow position:
Alignm length: 495
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 369

Conread position: 46-613
Cow position:
Alignm length: 601
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 142

Conread position: 46-627
Cow position:
Alignm length: 615
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 104

Conread position: 47-200
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 130, 54

Conread position: 47-612
Cow position:
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 363

Conread position: 47-613
Cow position:
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 364

Conread position: 47-613
Cow position:
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 172

Conread position: 47-619
Cow position:
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 54

Conread position: 47-627
Cow position:
Alignm length: 612
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 143

Conread position: 47-651
Cow position:
Alignm length: 648
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 370

Conread position: 47-651
Cow position:
Alignm length: 633
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 49-482
Cow position:
Alignm length: 456
Alignm identity: 310
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 49, 79

Conread position: 50-488
Cow position:
Alignm length: 449
Alignm identity: 286
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 91

Conread position: 50-574
Cow position:
Alignm length: 549
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 142

Conread position: 52-722
Cow position:
Alignm length: 693
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 43

Conread position: 67-627
Cow position:
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 67-627
Cow position:
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 68-723
Cow position:
Alignm length: 674
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 322

Conread position: 75-481
Cow position:
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 18

Conread position: 75-540
Cow position:
Alignm length: 488
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 337

Conread position: 75-610
Cow position:
Alignm length: 567
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 18

Conread position: 75-613
Cow position:
Alignm length: 569
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 332

Conread position: 75-668
Cow position:
Alignm length: 627
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 334

Conread position: 76-666
Cow position:
Alignm length: 617
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 106

Conread position: 76-698
Cow position:
Alignm length: 642
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 188

Conread position: 86-666
Cow position:
Alignm length: 613
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 7

Conread position: 87-454
Cow position:
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 88-654
Cow position:
Alignm length: 587
Alignm identity: 368
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 13

Conread position: 90-628
Cow position:
Alignm length: 563
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 102

Conread position: 94-345
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 86, 14

Conread position: 95-632
Cow position:
Alignm length: 569
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 428

Conread position: 95-667
Cow position:
Alignm length: 605
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 434

Conread position: 95-679
Cow position:
Alignm length: 619
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 246

Conread position: 123-474
Cow position:
Alignm length: 363
Alignm identity: 249
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 115, 57

Conread position: 123-569
Cow position:
Alignm length: 458
Alignm identity: 305
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 116, 57

Conread position: 123-610
Cow position:
Alignm length: 520
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 7

Conread position: 123-651
Cow position:
Alignm length: 561
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 7

Conread position: 124-488
Cow position:
Alignm length: 384
Alignm identity: 259
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 56, 108

Conread position: 137-700
Cow position:
Alignm length: 597
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 49

Conread position: 142-691
Cow position:
Alignm length: 569
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 194

Conread position: 157-681
Cow position:
Alignm length: 550
Alignm identity: 349
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 11, 265

Conread position: 158-613
Cow position:
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 251

Conread position: 176-495
Cow position:
Alignm length: 332
Alignm identity: 202
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 60, 220

Conread position: 179-627
Cow position:
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 14

Conread position: 179-643
Cow position:
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 48

Conread position: 179-696
Cow position:
Alignm length: 535
Alignm identity: 334
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 34

Conread position: 180-723
Cow position:
Alignm length: 566
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 173

Conread position: 188-564
Cow position:
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 216

Conread position: 193-670
Cow position:
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 213

Conread position: 211-689
Cow position:
Alignm length: 510
Alignm identity: 343
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 23, 169

Conread position: 215-723
Cow position:
Alignm length: 524
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 115

Conread position: 224-520
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 170

Conread position: 237-613
Cow position:
Alignm length: 405
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 286

Conread position: 241-722
Cow position:
Alignm length: 501
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 155

Conread position: 253-507
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 26, 149

Conread position: 264-700
Cow position:
Alignm length: 459
Alignm identity: 296
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 120

Conread position: 280-702
Cow position:
Alignm length: 444
Alignm identity: 284
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 136

Conread position: 282-602
Cow position:
Alignm length: 345
Alignm identity: 243
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 65, 121

Conread position: 299-627
Cow position:
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 303-667
Cow position:
Alignm length: 384
Alignm identity: 257
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 76, 20

Conread position: 306-687
Cow position:
Alignm length: 405
Alignm identity: 258
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 36

Conread position: 318-535
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 11

Conread position: 321-716
Cow position:
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 73

Conread position: 373-722
Cow position:
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 135

Conread position: 377-614
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 137

Conread position: 379-613
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 136

Conread position: 394-687
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 40

Conread position: 399-710
Cow position:
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 10, 94

Conread position: 415-722
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 13, 92

Conread position: 416-702
Cow position:
Alignm length: 304
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 46, 11

Conread position: 469-727
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 100, 41

Conread position: 509-723
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 164

Show alignments to all cow chromosomes.