Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 1-613
Cow position:
Alignm length: 655
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 112

Conread position: 1-616
Cow position:
Alignm length: 667
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 162

Conread position: 1-627
Cow position:
Alignm length: 669
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 420

Conread position: 5-397
Cow position:
Alignm length: 417
Alignm identity: 287
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 199

Conread position: 7-190
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 7-315
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 118

Conread position: 7-532
Cow position:
Alignm length: 544
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 57

Conread position: 7-613
Cow position:
Alignm length: 666
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 161

Conread position: 7-616
Cow position:
Alignm length: 650
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 533

Conread position: 7-619
Cow position:
Alignm length: 653
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 172

Conread position: 7-630
Cow position:
Alignm length: 676
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 7-669
Cow position:
Alignm length: 707
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 223

Conread position: 7-722
Cow position:
Alignm length: 767
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 330

Conread position: 7-722
Cow position:
Alignm length: 746
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 256

Conread position: 8-602
Cow position:
Alignm length: 634
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 270

Conread position: 8-701
Cow position:
Alignm length: 725
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 70

Conread position: 9-545
Cow position:
Alignm length: 565
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 191

Conread position: 9-556
Cow position:
Alignm length: 577
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 146

Conread position: 9-613
Cow position:
Alignm length: 649
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 189

Conread position: 9-613
Cow position:
Alignm length: 651
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 412

Conread position: 9-648
Cow position:
Alignm length: 682
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 304

Conread position: 10-570
Cow position:
Alignm length: 599
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 537

Conread position: 10-613
Cow position:
Alignm length: 643
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 409

Conread position: 13-613
Cow position:
Alignm length: 637
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 386

Conread position: 15-314
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 151

Conread position: 15-613
Cow position:
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 178

Conread position: 38-472
Cow position:
Alignm length: 459
Alignm identity: 306
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 8

Conread position: 41-699
Cow position:
Alignm length: 690
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 53

Conread position: 43-627
Cow position:
Alignm length: 626
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 203

Conread position: 45-273
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 45-295
Cow position:
Alignm length: 267
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 86

Conread position: 45-313
Cow position:
Alignm length: 285
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 176

Conread position: 45-354
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 37, 265

Conread position: 45-377
Cow position:
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 45-379
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 53, 10

Conread position: 45-381
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 45-564
Cow position:
Alignm length: 537
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 34

Conread position: 45-569
Cow position:
Alignm length: 544
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 56

Conread position: 45-607
Cow position:
Alignm length: 605
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 386

Conread position: 45-613
Cow position:
Alignm length: 609
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 372

Conread position: 45-613
Cow position:
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 157

Conread position: 45-623
Cow position:
Alignm length: 620
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 386

Conread position: 45-627
Cow position:
Alignm length: 621
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 101

Conread position: 45-627
Cow position:
Alignm length: 615
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 243

Conread position: 45-627
Cow position:
Alignm length: 621
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 372

Conread position: 45-627
Cow position:
Alignm length: 622
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 375

Conread position: 45-627
Cow position:
Alignm length: 624
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 383

Conread position: 45-627
Cow position:
Alignm length: 625
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 375

Conread position: 45-648
Cow position:
Alignm length: 643
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 184

Conread position: 45-687
Cow position:
Alignm length: 682
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 373

Conread position: 46-362
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 52, 127

Conread position: 46-567
Cow position:
Alignm length: 548
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 489

Conread position: 46-569
Cow position:
Alignm length: 554
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 373

Conread position: 46-613
Cow position:
Alignm length: 603
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 295

Conread position: 46-627
Cow position:
Alignm length: 618
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 260

Conread position: 46-627
Cow position:
Alignm length: 623
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 373

Conread position: 46-627
Cow position:
Alignm length: 623
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 374

Conread position: 46-722
Cow position:
Alignm length: 705
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 137

Conread position: 47-279
Cow position:
Alignm length: 236
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 148

Conread position: 47-304
Cow position:
Alignm length: 272
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 47-345
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 51, 157

Conread position: 47-368
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 69

Conread position: 47-454
Cow position:
Alignm length: 424
Alignm identity: 289
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 152

Conread position: 47-613
Cow position:
Alignm length: 596
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 137

Conread position: 47-613
Cow position:
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 368

Conread position: 47-613
Cow position:
Alignm length: 611
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 252

Conread position: 47-613
Cow position:
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 176

Conread position: 47-616
Cow position:
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 155

Conread position: 47-629
Cow position:
Alignm length: 622
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 198

Conread position: 47-707
Cow position:
Alignm length: 703
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 54

Conread position: 50-610
Cow position:
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 364

Conread position: 50-613
Cow position:
Alignm length: 600
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 367

Conread position: 50-613
Cow position:
Alignm length: 598
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 50-722
Cow position:
Alignm length: 709
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 192

Conread position: 52-604
Cow position:
Alignm length: 594
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 371

Conread position: 52-722
Cow position:
Alignm length: 701
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 127

Conread position: 56-572
Cow position:
Alignm length: 536
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 28

Conread position: 68-702
Cow position:
Alignm length: 667
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 245

Conread position: 75-627
Cow position:
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 18

Conread position: 86-529
Cow position:
Alignm length: 456
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 22

Conread position: 90-613
Cow position:
Alignm length: 557
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 313

Conread position: 90-651
Cow position:
Alignm length: 597
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 90

Conread position: 95-638
Cow position:
Alignm length: 576
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 303

Conread position: 95-666
Cow position:
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 314

Conread position: 96-627
Cow position:
Alignm length: 564
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 57

Conread position: 96-686
Cow position:
Alignm length: 623
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 312

Conread position: 101-391
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 77, 0

Conread position: 115-385
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 65, 54

Conread position: 124-532
Cow position:
Alignm length: 423
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 128

Conread position: 127-723
Cow position:
Alignm length: 617
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 176

Conread position: 128-630
Cow position:
Alignm length: 531
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 282

Conread position: 132-654
Cow position:
Alignm length: 558
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 84

Conread position: 144-540
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 254

Conread position: 160-722
Cow position:
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 112

Conread position: 180-627
Cow position:
Alignm length: 480
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 13

Conread position: 180-647
Cow position:
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 70

Conread position: 181-475
Cow position:
Alignm length: 304
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 10

Conread position: 181-627
Cow position:
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 97

Conread position: 181-703
Cow position:
Alignm length: 558
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 186-651
Cow position:
Alignm length: 506
Alignm identity: 343
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 38

Conread position: 187-723
Cow position:
Alignm length: 571
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 189-380
Cow position:
Alignm length: 208
Alignm identity: 162
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 47, 21

Conread position: 198-725
Cow position:
Alignm length: 547
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 323

Conread position: 204-631
Cow position:
Alignm length: 449
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 205-454
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 210-569
Cow position:
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 194

Conread position: 211-610
Cow position:
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 147

Conread position: 236-616
Cow position:
Alignm length: 401
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 82

Conread position: 276-613
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 127

Conread position: 280-701
Cow position:
Alignm length: 445
Alignm identity: 301
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 45

Conread position: 309-648
Cow position:
Alignm length: 354
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 9

Conread position: 311-610
Cow position:
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 7

Conread position: 311-627
Cow position:
Alignm length: 333
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 311-686
Cow position:
Alignm length: 401
Alignm identity: 275
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 35, 7

Conread position: 342-569
Cow position:
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 50

Conread position: 342-632
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 47, 25

Conread position: 351-723
Cow position:
Alignm length: 389
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 43

Conread position: 361-702
Cow position:
Alignm length: 359
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 368-627
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 26

Conread position: 395-732
Cow position:
Alignm length: 358
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 92

Conread position: 430-616
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 83

Conread position: 458-720
Cow position:
Alignm length: 277
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 51

Conread position: 475-723
Cow position:
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 35

Conread position: 494-725
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 120, 18

Conread position: 498-722
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 12

Show alignments to all cow chromosomes.