Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 1-633
Cow position:
Alignm length: 679
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 421

Conread position: 5-470
Cow position:
Alignm length: 490
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 59

Conread position: 5-569
Cow position:
Alignm length: 579
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 44

Conread position: 5-613
Cow position:
Alignm length: 650
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 35

Conread position: 7-257
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 0

Conread position: 7-353
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 189

Conread position: 7-488
Cow position:
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 79

Conread position: 7-607
Cow position:
Alignm length: 639
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 144

Conread position: 7-611
Cow position:
Alignm length: 645
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 229

Conread position: 7-632
Cow position:
Alignm length: 668
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 127

Conread position: 7-667
Cow position:
Alignm length: 722
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 410

Conread position: 7-690
Cow position:
Alignm length: 730
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 53

Conread position: 7-726
Cow position:
Alignm length: 755
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 98

Conread position: 8-295
Cow position:
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 8-380
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 241

Conread position: 9-569
Cow position:
Alignm length: 585
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 9-613
Cow position:
Alignm length: 649
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 412

Conread position: 9-627
Cow position:
Alignm length: 665
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 61

Conread position: 9-627
Cow position:
Alignm length: 660
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 411

Conread position: 9-627
Cow position:
Alignm length: 663
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 414

Conread position: 9-627
Cow position:
Alignm length: 660
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 168

Conread position: 9-630
Cow position:
Alignm length: 667
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 197

Conread position: 9-632
Cow position:
Alignm length: 672
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 142

Conread position: 10-360
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 229

Conread position: 13-488
Cow position:
Alignm length: 493
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 214

Conread position: 13-627
Cow position:
Alignm length: 651
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 318

Conread position: 13-654
Cow position:
Alignm length: 675
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 36

Conread position: 13-700
Cow position:
Alignm length: 722
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 265

Conread position: 15-530
Cow position:
Alignm length: 548
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 405

Conread position: 15-610
Cow position:
Alignm length: 646
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 59

Conread position: 15-613
Cow position:
Alignm length: 644
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 509

Conread position: 15-614
Cow position:
Alignm length: 642
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 400

Conread position: 16-651
Cow position:
Alignm length: 677
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 32-486
Cow position:
Alignm length: 475
Alignm identity: 312
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 57

Conread position: 35-627
Cow position:
Alignm length: 632
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 149

Conread position: 39-627
Cow position:
Alignm length: 631
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 182

Conread position: 41-519
Cow position:
Alignm length: 505
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 7

Conread position: 41-569
Cow position:
Alignm length: 557
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 10

Conread position: 42-723
Cow position:
Alignm length: 710
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 26

Conread position: 43-613
Cow position:
Alignm length: 616
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 43-627
Cow position:
Alignm length: 625
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 159

Conread position: 44-344
Cow position:
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 45-325
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 45-377
Cow position:
Alignm length: 360
Alignm identity: 248
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 324

Conread position: 45-433
Cow position:
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 56

Conread position: 45-508
Cow position:
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 56

Conread position: 45-623
Cow position:
Alignm length: 620
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 360

Conread position: 45-627
Cow position:
Alignm length: 613
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 287

Conread position: 45-627
Cow position:
Alignm length: 625
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 242

Conread position: 45-627
Cow position:
Alignm length: 625
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 296

Conread position: 45-638
Cow position:
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 369

Conread position: 45-653
Cow position:
Alignm length: 652
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 195

Conread position: 45-653
Cow position:
Alignm length: 643
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 370

Conread position: 45-654
Cow position:
Alignm length: 664
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 388

Conread position: 45-668
Cow position:
Alignm length: 664
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 157

Conread position: 46-454
Cow position:
Alignm length: 429
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 143

Conread position: 46-454
Cow position:
Alignm length: 435
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 234

Conread position: 46-527
Cow position:
Alignm length: 511
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 374

Conread position: 46-607
Cow position:
Alignm length: 593
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 365

Conread position: 46-627
Cow position:
Alignm length: 622
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 46-627
Cow position:
Alignm length: 618
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 156

Conread position: 46-627
Cow position:
Alignm length: 623
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 374

Conread position: 46-633
Cow position:
Alignm length: 618
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 180

Conread position: 46-665
Cow position:
Alignm length: 660
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 374

Conread position: 47-385
Cow position:
Alignm length: 352
Alignm identity: 242
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 152

Conread position: 47-561
Cow position:
Alignm length: 547
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 103

Conread position: 47-569
Cow position:
Alignm length: 549
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 261

Conread position: 47-569
Cow position:
Alignm length: 552
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 370

Conread position: 47-613
Cow position:
Alignm length: 606
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 214

Conread position: 47-613
Cow position:
Alignm length: 606
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 368

Conread position: 47-613
Cow position:
Alignm length: 618
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 381

Conread position: 47-613
Cow position:
Alignm length: 593
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 155

Conread position: 47-613
Cow position:
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 372

Conread position: 47-627
Cow position:
Alignm length: 621
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 355

Conread position: 47-633
Cow position:
Alignm length: 630
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 369

Conread position: 47-651
Cow position:
Alignm length: 637
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 317

Conread position: 50-723
Cow position:
Alignm length: 698
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 58

Conread position: 51-569
Cow position:
Alignm length: 548
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 23

Conread position: 51-687
Cow position:
Alignm length: 680
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 51-700
Cow position:
Alignm length: 677
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 147

Conread position: 52-700
Cow position:
Alignm length: 692
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 124

Conread position: 75-651
Cow position:
Alignm length: 611
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 335

Conread position: 87-702
Cow position:
Alignm length: 642
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 80

Conread position: 90-481
Cow position:
Alignm length: 398
Alignm identity: 251
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 160, 88

Conread position: 108-434
Cow position:
Alignm length: 343
Alignm identity: 229
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 130, 34

Conread position: 123-627
Cow position:
Alignm length: 537
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 288

Conread position: 125-613
Cow position:
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 62

Conread position: 128-610
Cow position:
Alignm length: 516
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 281

Conread position: 170-608
Cow position:
Alignm length: 467
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 238

Conread position: 180-528
Cow position:
Alignm length: 368
Alignm identity: 242
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 58, 227

Conread position: 188-656
Cow position:
Alignm length: 502
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 204

Conread position: 195-613
Cow position:
Alignm length: 449
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 212

Conread position: 203-632
Cow position:
Alignm length: 459
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 7

Conread position: 203-653
Cow position:
Alignm length: 496
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 249

Conread position: 224-613
Cow position:
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 312

Conread position: 237-613
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 168

Conread position: 238-613
Cow position:
Alignm length: 389
Alignm identity: 248
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 282

Conread position: 250-707
Cow position:
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 115

Conread position: 273-708
Cow position:
Alignm length: 444
Alignm identity: 295
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 83, 64

Conread position: 289-722
Cow position:
Alignm length: 448
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 96

Conread position: 304-668
Cow position:
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 101

Conread position: 305-631
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 6, 20

Conread position: 325-633
Cow position:
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 5

Conread position: 335-611
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 61

Conread position: 345-648
Cow position:
Alignm length: 318
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 49

Conread position: 374-610
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 39, 17

Conread position: 385-561
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 132

Conread position: 394-632
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 119

Conread position: 394-702
Cow position:
Alignm length: 323
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 48

Conread position: 397-633
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 113

Conread position: 400-662
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 13, 40

Conread position: 428-627
Cow position:
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 11

Conread position: 440-722
Cow position:
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 72

Conread position: 446-723
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 16, 65

Conread position: 461-652
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 110, 49

Conread position: 509-707
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 163

Conread position: 568-722
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 54

Conread position: 585-722
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.