Cow genome map

Conread name: Ova1-OVRM10197E07

Conread position: 1-261
Cow position: chr11:75255819-75256089 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 29, 13

Conread position: 1-619
Cow position: chr11:60170198-60170819 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 417
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 9

Conread position: 3-370
Cow position: chr11:2619934-2620300 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 240
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 205

Conread position: 5-270
Cow position: chr11:36453748-36453475 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 22, 7

Conread position: 5-296
Cow position: chr11:45550042-45550334 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 201
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 149

Conread position: 6-233
Cow position: chr11:42210455-42210688 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 26

Conread position: 6-234
Cow position: chr11:40231080-40230849 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 20

Conread position: 6-264
Cow position: chr11:20804942-20804675 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 89, 214

Conread position: 6-268
Cow position: chr11:35956738-35956992 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 106, 20

Conread position: 6-297
Cow position: chr11:81317340-81317050 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 150

Conread position: 6-355
Cow position: chr11:56459633-56459282 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 269

Conread position: 6-366
Cow position: chr11:31892860-31893227 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 173

Conread position: 6-370
Cow position: chr11:33863184-33862805 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 164

Conread position: 6-391
Cow position: chr11:49485787-49486180 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 145

Conread position: 6-395
Cow position: chr11:16119024-16118639 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 183

Conread position: 6-396
Cow position: chr11:7680881-7681280 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 258
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 82, 20

Conread position: 6-396
Cow position: chr11:18755762-18756157 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 8

Conread position: 6-397
Cow position: chr11:61485895-61485499 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 20, 226

Conread position: 6-485
Cow position: chr11:12178898-12179370 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 329
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 89, 14

Conread position: 6-551
Cow position: chr11:59871733-59872282 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 350
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 16, 215

Conread position: 6-593
Cow position: chr11:41093944-41093355 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 366
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 62

Conread position: 6-606
Cow position: chr11:40351139-40350518 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 403
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 83, 26

Conread position: 6-628
Cow position: chr11:17452984-17453611 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 103

Conread position: 6-689
Cow position: chr11:62787589-62788274 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 443
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 113, 30

Conread position: 6-721
Cow position: chr11:2987749-2987047 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 456
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 186, 25

Conread position: 6-722
Cow position: chr11:48485156-48484427 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 272

Conread position: 6-730
Cow position: chr11:50267307-50268026 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 192

Conread position: 7-320
Cow position: chr11:34457719-34458035 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 20, 102

Conread position: 8-699
Cow position: chr11:53855457-53856157 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 146

Conread position: 9-308
Cow position: chr11:34608861-34609169 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 92, 17

Conread position: 15-278
Cow position: chr11:22290484-22290220 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 102

Conread position: 24-484
Cow position: chr11:9561293-9560826 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 307
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 84, 199

Conread position: 31-184
Cow position: chr11:84751390-84751544 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 122

Conread position: 31-302
Cow position: chr11:1801290-1801020 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 18

Conread position: 31-395
Cow position: chr11:47158840-47158479 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 85

Conread position: 32-263
Cow position: chr11:30226146-30225905 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 39-300
Cow position: chr11:85354482-85354212 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 40-261
Cow position: chr11:76667105-76666881 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 48, 104

Conread position: 42-286
Cow position: chr11:74710810-74711063 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 44, 171

Conread position: 72-606
Cow position: chr11:35570240-35569697 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 356
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 55, 197

Conread position: 73-588
Cow position: chr11:46777302-46776776 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 334
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 71, 27

Conread position: 75-642
Cow position: chr11:21459837-21460407 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 31

Conread position: 92-395
Cow position: chr11:28394079-28394388 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 18

Conread position: 92-396
Cow position: chr11:4024347-4024034 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 26, 74

Conread position: 92-722
Cow position: chr11:46142977-46142344 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 395
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 312

Conread position: 116-730
Cow position: chr11:44621767-44622382 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 87

Conread position: 138-636
Cow position: chr11:21155611-21155126 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 337
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 28

Conread position: 170-396
Cow position: chr11:77749138-77749369 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 215

Show alignments to all cow chromosomes.