Cow genome map
| Conread name: | Ova1-OVRM10197E07 |
| Conread position: | 1-352 |
| Cow position: | chr21:26480144-26479787 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 1-730 |
| Cow position: | chr21:34575036-34574333 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 5-306 |
| Cow position: | chr21:2906859-2906562 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 5-395 |
| Cow position: | chr21:30313085-30313473 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 6-323 |
| Cow position: | chr21:40647220-40647549 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 6-395 |
| Cow position: | chr21:39074507-39074112 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 261 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 85, 16 |
| Conread position: | 6-395 |
| Cow position: | chr21:44262585-44262967 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 273 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 6-396 |
| Cow position: | chr21:1263253-1263652 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 20, 154 |
| Conread position: | 6-396 |
| Cow position: | chr21:13199321-13199705 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 6-484 |
| Cow position: | chr21:38241590-38241128 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 331 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 152 |
| Conread position: | 6-576 |
| Cow position: | chr21:3479799-3480375 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 368 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 202 |
| Conread position: | 6-594 |
| Cow position: | chr21:78650-78056 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 401 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 6-610 |
| Cow position: | chr21:5088288-5088891 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 400 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 6-623 |
| Cow position: | chr21:42391130-42390518 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 401 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 7-395 |
| Cow position: | chr21:22197020-22196638 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 8-240 |
| Cow position: | chr21:32438135-32438383 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 8-395 |
| Cow position: | chr21:37192149-37191774 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 120 |
| Conread position: | 13-697 |
| Cow position: | chr21:14122077-14121390 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 13-699 |
| Cow position: | chr21:23383920-23383244 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 444 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 120, 14 |
| Conread position: | 17-396 |
| Cow position: | chr21:32830031-32829649 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 150 |
| Conread position: | 18-352 |
| Cow position: | chr21:26884312-26884646 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 88, 51 |
| Conread position: | 24-396 |
| Cow position: | chr21:1631369-1631733 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 124, 60 |
| Conread position: | 25-712 |
| Cow position: | chr21:37613069-37613747 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 433 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 81, 130 |
| Conread position: | 30-576 |
| Cow position: | chr21:15943577-15944112 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 359 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 31-269 |
| Cow position: | chr21:46968317-46968071 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 31-675 |
| Cow position: | chr21:44093084-44092420 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 421 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 55, 226 |
| Conread position: | 32-400 |
| Cow position: | chr21:34592070-34591702 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 154, 101 |
| Conread position: | 44-261 |
| Cow position: | chr21:40628690-40628917 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 46-699 |
| Cow position: | chr21:9329642-9328972 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 244 |
| Conread position: | 80-595 |
| Cow position: | chr21:31499468-31499980 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 339 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 86-704 |
| Cow position: | chr21:4733069-4732457 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 379 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 101, 26 |
| Conread position: | 88-702 |
| Cow position: | chr21:44805101-44804502 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 383 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 89-729 |
| Cow position: | chr21:2878372-2877727 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 404 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 92-395 |
| Cow position: | chr21:20244128-20243816 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 95-270 |
| Cow position: | chr21:21427353-21427532 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 127-607 |
| Cow position: | chr21:5593810-5593331 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 316 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 59, 160 |
| Conread position: | 186-391 |
| Cow position: | chr21:1059836-1060043 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 0 |
Show alignments to all cow chromosomes.