Cow genome map


           Conread name:
           Ova1-OVRM10197E07
        

               Conread position:
               5-337
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               6-199
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               25, 131
               

               Conread position:
               6-308
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 118
               

               Conread position:
               6-320
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               6-360
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               6-367
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               6-371
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 220
               

               Conread position:
               6-389
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               169, 26
               

               Conread position:
               6-390
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               80, 297
               

               Conread position:
               6-395
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               17, 321
               

               Conread position:
               6-396
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               6-396
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               6-402
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               6-406
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 25
               

               Conread position:
               6-414
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               180, 20
               

               Conread position:
               6-590
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               369
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               6-594
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               386
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               34, 219
               

               Conread position:
               6-626
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               393
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               6-652
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               429
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               21, 96
               

               Conread position:
               6-693
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               6-705
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               454
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               17, 31
               

               Conread position:
               6-708
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               453
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               17, 155
               

               Conread position:
               6-712
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               448
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               6-721
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               452
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               6-729
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               596
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 163
               

               Conread position:
               7-277
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 26
               

               Conread position:
               7-396
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 185
               

               Conread position:
               7-592
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               8-271
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 176
               

               Conread position:
               8-487
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               8-729
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 100
               

               Conread position:
               13-730
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               14-264
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 156
               

               Conread position:
               14-697
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 86
               

               Conread position:
               15-592
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 123
               

               Conread position:
               17-705
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               420
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               88, 155
               

               Conread position:
               25-697
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               446
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               70, 124
               

               Conread position:
               26-302
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               31, 20
               

               Conread position:
               32-698
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 195
               

               Conread position:
               42-569
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               361
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               46-370
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               43, 181
               

               Conread position:
               46-395
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 345
               

               Conread position:
               49-718
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 107
               

               Conread position:
               52-676
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               62-264
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               32, 74
               

               Conread position:
               62-317
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 190
               

               Conread position:
               63-360
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               73-576
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               75-396
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               75-396
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               78-396
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               80-698
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 206
               

               Conread position:
               80-729
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               423
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 149
               

               Conread position:
               85-728
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               409
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               89-704
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               402
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               99, 129
               

               Conread position:
               89-722
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               396
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               27, 317
               

               Conread position:
               92-396
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 66
               

               Conread position:
               92-402
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               54, 46
               

               Conread position:
               92-722
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               376
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 338
               

               Conread position:
               92-722
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               401
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               93-404
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               23, 130
               

               Conread position:
               115-285
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               115-370
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               7, 147
               

               Conread position:
               228-678
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               39, 19
               
Show alignments to all cow chromosomes.