Cow genome map
| Conread name: | Ova1-OVRM10197E07 |
| Conread position: | 1-627 |
| Cow position: | chr4:45079145-45078500 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 406 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 13 |
| Conread position: | 1-644 |
| Cow position: | chr4:20789728-20790374 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 98 |
| Conread position: | 6-184 |
| Cow position: | chr4:4116632-4116813 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 6-257 |
| Cow position: | chr4:69047340-69047085 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 20 |
| Conread position: | 6-285 |
| Cow position: | chr4:9391892-9391607 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 193 |
| Conread position: | 6-296 |
| Cow position: | chr4:55539914-55539624 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 106, 33 |
| Conread position: | 6-304 |
| Cow position: | chr4:37947999-37947697 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 6-395 |
| Cow position: | chr4:65345308-65344927 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 6-400 |
| Cow position: | chr4:34224349-34224747 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 6-484 |
| Cow position: | chr4:45765043-45764563 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 153 |
| Conread position: | 6-705 |
| Cow position: | chr4:16641756-16642462 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 438 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 6-707 |
| Cow position: | chr4:27177766-27178472 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 443 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 6-729 |
| Cow position: | chr4:46491878-46492615 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 466 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 31, 156 |
| Conread position: | 7-306 |
| Cow position: | chr4:60775410-60775700 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 7-365 |
| Cow position: | chr4:22492214-22492579 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 253 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 18, 154 |
| Conread position: | 7-651 |
| Cow position: | chr4:1983848-1984500 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 16 |
| Conread position: | 8-370 |
| Cow position: | chr4:21504181-21503817 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 20, 134 |
| Conread position: | 30-624 |
| Cow position: | chr4:42960639-42961225 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 379 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 49-270 |
| Cow position: | chr4:38932302-38932525 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 55-335 |
| Cow position: | chr4:63376786-63377075 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 68-402 |
| Cow position: | chr4:49031689-49032038 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 73-286 |
| Cow position: | chr4:28848300-28848518 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 79-722 |
| Cow position: | chr4:46152418-46151765 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 421 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 86-665 |
| Cow position: | chr4:18844820-18845398 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 367 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 89-722 |
| Cow position: | chr4:7806193-7806830 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 399 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 320 |
| Conread position: | 92-394 |
| Cow position: | chr4:62962331-62962021 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 92-396 |
| Cow position: | chr4:60224846-60224534 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 66 |
| Conread position: | 92-402 |
| Cow position: | chr4:60718703-60719015 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 37, 128 |
| Conread position: | 115-730 |
| Cow position: | chr4:56303119-56303717 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 117-301 |
| Cow position: | chr4:45993277-45993463 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 159 |
| Conread position: | 122-370 |
| Cow position: | chr4:26671639-26671395 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 190-594 |
| Cow position: | chr4:34631902-34631521 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 183, 37 |
| Conread position: | 204-729 |
| Cow position: | chr4:11390388-11389865 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 341 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 118, 53 |
Show alignments to all cow chromosomes.