Cow genome map
| Conread name: | Ova1-OVRM10197E07 |
| Conread position: | 1-287 |
| Cow position: | chr5:70783848-70783567 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 9 |
| Conread position: | 6-285 |
| Cow position: | chr5:37653362-37653640 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 6-308 |
| Cow position: | chr5:72299231-72298919 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 6-393 |
| Cow position: | chr5:39467932-39468328 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 6-394 |
| Cow position: | chr5:26100771-26101174 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 6-396 |
| Cow position: | chr5:72540979-72541356 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 273, 29 |
| Conread position: | 6-597 |
| Cow position: | chr5:41020803-41020227 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 411 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 99, 20 |
| Conread position: | 6-736 |
| Cow position: | chr5:37715584-37714837 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 470 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 20, 24 |
| Conread position: | 7-308 |
| Cow position: | chr5:28331585-28331276 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 7-484 |
| Cow position: | chr5:48409404-48408933 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 312 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 8-730 |
| Cow position: | chr5:70771192-70771907 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 461 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 9-253 |
| Cow position: | chr5:6537993-6538239 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 14-395 |
| Cow position: | chr5:45941944-45941553 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 172, 74 |
| Conread position: | 15-729 |
| Cow position: | chr5:22114057-22113341 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 448 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 79, 17 |
| Conread position: | 17-306 |
| Cow position: | chr5:74778787-74778486 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 25-730 |
| Cow position: | chr5:51075062-51074367 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 63 |
| Conread position: | 26-729 |
| Cow position: | chr5:28678389-28677695 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 359 |
| Conread position: | 31-702 |
| Cow position: | chr5:28037157-28037829 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 244 |
| Conread position: | 42-396 |
| Cow position: | chr5:26186724-26186359 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 67-263 |
| Cow position: | chr5:70846866-70847067 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 79-722 |
| Cow position: | chr5:39448428-39447795 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 406 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 89-397 |
| Cow position: | chr5:52229226-52228922 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 177 |
| Conread position: | 89-718 |
| Cow position: | chr5:1338796-1338163 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 399 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 24, 317 |
| Conread position: | 91-320 |
| Cow position: | chr5:17276730-17276962 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 53 |
| Conread position: | 95-398 |
| Cow position: | chr5:16960305-16960004 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 91, 175 |
| Conread position: | 115-395 |
| Cow position: | chr5:6741489-6741193 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 38 |
| Conread position: | 192-729 |
| Cow position: | chr5:70249367-70249902 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 344 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 95, 209 |
| Conread position: | 276-730 |
| Cow position: | chr5:27899826-27899363 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 304 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 148, 79 |
| Conread position: | 335-730 |
| Cow position: | chr5:8787266-8786884 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 80 |
| Conread position: | 427-721 |
| Cow position: | chr5:63828242-63827943 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 65 |
Show alignments to all cow chromosomes.