Cow genome map
| Conread name: | Ova1-OVRM10197E07 |
| Conread position: | 1-736 |
| Cow position: | chr6:65011344-65012061 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 19 |
| Conread position: | 4-555 |
| Cow position: | chr6:6277953-6278521 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 357 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 278 |
| Conread position: | 6-275 |
| Cow position: | chr6:35724562-35724841 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 20, 153 |
| Conread position: | 6-308 |
| Cow position: | chr6:68826683-68826371 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 6-352 |
| Cow position: | chr6:19409460-19409813 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 112 |
| Conread position: | 6-395 |
| Cow position: | chr6:33896463-33896069 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 269 |
| Conread position: | 6-395 |
| Cow position: | chr6:54376736-54377132 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 6-396 |
| Cow position: | chr6:7049184-7049567 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 89, 20 |
| Conread position: | 6-622 |
| Cow position: | chr6:31304198-31304819 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 162 |
| Conread position: | 6-705 |
| Cow position: | chr6:15471636-15470924 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 209 |
| Conread position: | 6-722 |
| Cow position: | chr6:14928636-14929348 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 436 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 6-722 |
| Cow position: | chr6:15991760-15991042 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 7-244 |
| Cow position: | chr6:68309354-68309107 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-308 |
| Cow position: | chr6:7161941-7162244 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 8-712 |
| Cow position: | chr6:64031958-64031280 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 449 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 18 |
| Conread position: | 13-396 |
| Cow position: | chr6:32487747-32487368 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 29 |
| Conread position: | 13-402 |
| Cow position: | chr6:27138928-27138538 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 95, 276 |
| Conread position: | 18-396 |
| Cow position: | chr6:38801992-38801609 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 9, 63 |
| Conread position: | 24-710 |
| Cow position: | chr6:65859153-65858464 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 438 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 30-260 |
| Cow position: | chr6:24045478-24045239 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 32-352 |
| Cow position: | chr6:57395763-57396086 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 238 |
| Conread position: | 32-437 |
| Cow position: | chr6:53773264-53773685 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 45-396 |
| Cow position: | chr6:44871841-44872209 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 71-410 |
| Cow position: | chr6:66751019-66751360 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 80-370 |
| Cow position: | chr6:54063737-54064040 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 80-396 |
| Cow position: | chr6:3485164-3484837 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 89-736 |
| Cow position: | chr6:35873465-35872819 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 398 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 212 |
| Conread position: | 91-250 |
| Cow position: | chr6:2325054-2324891 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 92-722 |
| Cow position: | chr6:16410323-16410950 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 395 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 92-722 |
| Cow position: | chr6:20581508-20580875 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 389 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 42, 313 |
| Conread position: | 99-717 |
| Cow position: | chr6:14805596-14806197 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 401 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 14 |
| Conread position: | 122-722 |
| Cow position: | chr6:54758652-54759268 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 392 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 250 |
| Conread position: | 225-392 |
| Cow position: | chr6:53212044-53211874 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 483-729 |
| Cow position: | chr6:51370620-51370862 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 127, 98 |
Show alignments to all cow chromosomes.