Cow genome map
| Conread name: | Ova1-OVRM10197E07 |
| Conread position: | 1-396 |
| Cow position: | chrX:29196765-29197163 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 111, 123 |
| Conread position: | 3-503 |
| Cow position: | chrX:12102948-12102443 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 347 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 5-396 |
| Cow position: | chrX:1430048-1430450 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 60 |
| Conread position: | 6-231 |
| Cow position: | chrX:23352886-23353120 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 6-270 |
| Cow position: | chrX:16858657-16858399 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 6-302 |
| Cow position: | chrX:17159100-17158799 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 6-343 |
| Cow position: | chrX:15568863-15568528 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 6-393 |
| Cow position: | chrX:8807523-8807126 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 158 |
| Conread position: | 6-395 |
| Cow position: | chrX:2878731-2878326 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 182, 17 |
| Conread position: | 6-396 |
| Cow position: | chrX:30086286-30085888 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 6-402 |
| Cow position: | chrX:19650476-19650083 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 272 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 6-625 |
| Cow position: | chrX:33822106-33822746 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 409 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 6-703 |
| Cow position: | chrX:3951879-3952579 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 151 |
| Conread position: | 6-705 |
| Cow position: | chrX:10410074-10409358 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 139 |
| Conread position: | 6-729 |
| Cow position: | chrX:6026683-6025960 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 454 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 6-729 |
| Cow position: | chrX:7809978-7809255 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 444 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 6-729 |
| Cow position: | chrX:17985576-17984883 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 26 |
| Conread position: | 7-275 |
| Cow position: | chrX:13266476-13266750 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 7-320 |
| Cow position: | chrX:39903476-39903165 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 19, 48 |
| Conread position: | 7-394 |
| Cow position: | chrX:40496566-40496160 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 134 |
| Conread position: | 8-394 |
| Cow position: | chrX:28666942-28666534 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 10 |
| Conread position: | 11-623 |
| Cow position: | chrX:28079823-28080432 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 405 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 175 |
| Conread position: | 14-236 |
| Cow position: | chrX:33668145-33668374 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 126 |
| Conread position: | 14-396 |
| Cow position: | chrX:23314780-23314393 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 14-730 |
| Cow position: | chrX:164923-165640 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 462 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 12, 194 |
| Conread position: | 18-642 |
| Cow position: | chrX:23928130-23927520 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 410 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 111, 7 |
| Conread position: | 20-370 |
| Cow position: | chrX:23032502-23032854 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 120 |
| Conread position: | 30-396 |
| Cow position: | chrX:30113109-30113478 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 31-319 |
| Cow position: | chrX:37453255-37453547 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 114, 54 |
| Conread position: | 31-350 |
| Cow position: | chrX:8107807-8108135 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 32, 128 |
| Conread position: | 32-238 |
| Cow position: | chrX:13139130-13138925 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 99 |
| Conread position: | 53-396 |
| Cow position: | chrX:31372524-31372882 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 60, 194 |
| Conread position: | 57-396 |
| Cow position: | chrX:678033-677676 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 45, 163 |
| Conread position: | 58-731 |
| Cow position: | chrX:23515413-23514721 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 265 |
| Conread position: | 74-396 |
| Cow position: | chrX:35935687-35935363 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 13, 145 |
| Conread position: | 78-707 |
| Cow position: | chrX:37832372-37831741 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 395 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 109, 33 |
| Conread position: | 79-270 |
| Cow position: | chrX:48812479-48812677 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 95-730 |
| Cow position: | chrX:24006721-24006073 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 97-729 |
| Cow position: | chrX:41847420-41846786 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 396 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 97-730 |
| Cow position: | chrX:2248239-2247583 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 126-729 |
| Cow position: | chrX:34008890-34009498 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 133-571 |
| Cow position: | chrX:24923004-24923443 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 206-722 |
| Cow position: | chrX:11819589-11820099 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 273 |
Show alignments to all cow chromosomes.