Cow genome map

Conread name: Ova1-OVRM10205C12

Conread position: 3-721
Cow position: chr14:25795281-25794563 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 333

Conread position: 8-516
Cow position: chr14:3127780-3127272 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 291
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-711
Cow position: chr14:3101345-3100648 (view UCSC Genome Browser custom track)
Alignm length: 710
Alignm identity: 418
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 14

Conread position: 8-719
Cow position: chr14:3155972-3156674 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 157

Conread position: 11-525
Cow position: chr14:25836712-25837226 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 299
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 75

Conread position: 11-574
Cow position: chr14:25860269-25860827 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 340
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 51

Conread position: 11-720
Cow position: chr14:25836376-25837085 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 11-721
Cow position: chr14:3080601-3079891 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 409
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 61

Conread position: 11-721
Cow position: chr14:25783589-25784299 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 57

Conread position: 11-721
Cow position: chr14:25784009-25784719 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 57

Conread position: 11-721
Cow position: chr14:25859849-25860559 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 417
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 75

Conread position: 11-721
Cow position: chr14:25876816-25877526 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 75

Conread position: 20-720
Cow position: chr14:25795012-25794311 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 36-721
Cow position: chr14:3080744-3080059 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 399
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 39

Conread position: 36-721
Cow position: chr14:25876337-25877022 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 174

Conread position: 38-721
Cow position: chr14:25794910-25794226 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 408
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 36, 17

Conread position: 41-721
Cow position: chr14:25859459-25860139 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 180

Conread position: 42-559
Cow position: chr14:25877351-25877868 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 307
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 201, 187

Conread position: 42-721
Cow position: chr14:3080906-3080227 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 34

Conread position: 42-721
Cow position: chr14:25859292-25859971 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 136

Conread position: 44-721
Cow position: chr14:25876513-25877190 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 28

Conread position: 73-721
Cow position: chr14:25783483-25784131 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 159

Conread position: 73-721
Cow position: chr14:25783903-25784551 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 159

Conread position: 75-721
Cow position: chr14:25859578-25860223 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 398
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 10

Conread position: 75-721
Cow position: chr14:25859830-25860475 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 10

Conread position: 78-718
Cow position: chr14:25795038-25794398 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 87

Conread position: 81-721
Cow position: chr14:25876634-25877274 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 90

Conread position: 84-630
Cow position: chr14:25794696-25794151 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 338
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 149, 159

Conread position: 84-720
Cow position: chr14:25795452-25794816 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 329

Conread position: 84-721
Cow position: chr14:25836113-25836750 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 90-720
Cow position: chr14:25859256-25859886 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 67

Conread position: 93-699
Cow position: chr14:447580-448186 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 350
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 150, 141

Conread position: 100-477
Cow position: chr14:25784350-25784727 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 227
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 100-614
Cow position: chr14:25860274-25860788 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 301
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 99

Conread position: 100-702
Cow position: chr14:25794764-25794160 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 47

Conread position: 100-720
Cow position: chr14:25783594-25784214 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 226

Conread position: 100-721
Cow position: chr14:25784014-25784635 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 101-519
Cow position: chr14:3080091-3079673 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 251
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 64

Conread position: 101-561
Cow position: chr14:3100838-3100378 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 283
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 140, 127

Conread position: 101-561
Cow position: chr14:25910830-25911290 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 284
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 48, 69

Conread position: 101-600
Cow position: chr14:3127771-3127272 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 297
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 64

Conread position: 101-647
Cow position: chr14:25877326-25877872 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 328
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 110, 98

Conread position: 101-702
Cow position: chr14:25860023-25860624 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 57

Conread position: 101-702
Cow position: chr14:25895029-25895630 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 344
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 69

Conread position: 101-710
Cow position: chr14:25895701-25896310 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 363
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 141, 133

Conread position: 101-719
Cow position: chr14:25859771-25860389 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 375
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 116, 137

Conread position: 101-720
Cow position: chr14:3080595-3079976 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 63

Conread position: 101-720
Cow position: chr14:25877074-25877693 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 57

Conread position: 101-721
Cow position: chr14:3080427-3079807 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 64

Conread position: 101-721
Cow position: chr14:25836298-25836918 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 152

Conread position: 101-721
Cow position: chr14:25836550-25837170 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 233

Conread position: 104-688
Cow position: chr14:3155900-3156484 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 35

Conread position: 104-702
Cow position: chr14:25877161-25877759 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 369
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 67

Conread position: 104-720
Cow position: chr14:25860110-25860726 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 373
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 67

Conread position: 104-721
Cow position: chr14:25783346-25783963 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 127

Conread position: 105-721
Cow position: chr14:3101333-3100722 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 131

Conread position: 124-717
Cow position: chr14:3128000-3127407 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 358
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 40

Conread position: 162-708
Cow position: chr14:25783320-25783866 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 188-611
Cow position: chr14:3155411-3155834 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 263
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 213, 223

Conread position: 189-721
Cow position: chr14:3128352-3127823 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 325
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 105, 99

Conread position: 230-721
Cow position: chr14:3127978-3127487 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 306
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 106

Conread position: 256-721
Cow position: chr14:680377-680842 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 279
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 317, 305

Conread position: 256-721
Cow position: chr14:25783330-25783795 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 158

Conread position: 258-719
Cow position: chr14:3128118-3127657 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 153

Conread position: 258-721
Cow position: chr14:25895774-25896237 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 279
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 15

Conread position: 260-721
Cow position: chr14:25895440-25895901 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 270
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 120, 114

Conread position: 271-721
Cow position: chr14:3155899-3156349 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 134

Conread position: 272-663
Cow position: chr14:680897-681288 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 247
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 141, 147

Conread position: 272-698
Cow position: chr14:3155411-3155837 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 261
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 272-720
Cow position: chr14:25836049-25836497 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 273
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 307, 293

Conread position: 272-721
Cow position: chr14:3080844-3080395 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 60

Conread position: 272-721
Cow position: chr14:3081012-3080563 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 275
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 40, 63

Conread position: 272-721
Cow position: chr14:3155984-3156433 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 293

Conread position: 272-721
Cow position: chr14:25910833-25911282 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 275
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 64

Conread position: 273-720
Cow position: chr14:3128187-3127740 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 274
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 128, 141

Conread position: 282-721
Cow position: chr14:25859280-25859719 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 275
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 119, 123

Conread position: 287-516
Cow position: chr14:420660-420889 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 118

Conread position: 292-720
Cow position: chr14:3128000-3127572 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 98

Conread position: 293-702
Cow position: chr14:3127747-3127338 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 267

Conread position: 293-720
Cow position: chr14:680246-680673 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 254
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 375, 389

Conread position: 293-721
Cow position: chr14:680834-681262 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 112

Conread position: 318-721
Cow position: chr14:447553-447956 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 257
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 258, 269

Conread position: 329-721
Cow position: chr14:3100862-3100470 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 246
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 72, 77

Conread position: 334-708
Cow position: chr14:3101439-3101066 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 56, 70

Conread position: 335-708
Cow position: chr14:25859249-25859622 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 241
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 192, 209

Conread position: 335-721
Cow position: chr14:25783325-25783711 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 347-708
Cow position: chr14:25895443-25895804 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 112

Conread position: 351-720
Cow position: chr14:3155406-3155775 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 239
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 62

Conread position: 406-721
Cow position: chr14:25783312-25783627 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 65

Conread position: 416-721
Cow position: chr14:680201-680506 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 192
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 147, 166

Conread position: 421-721
Cow position: chr14:3155881-3156181 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 194
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 67, 52

Conread position: 423-721
Cow position: chr14:25836036-25836330 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 192
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 12

Show alignments to all cow chromosomes.