Cow genome map


           Conread name:
           Ova1-OVRM10205C12
        

               Conread position:
               3-721
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 333
               

               Conread position:
               8-516
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-711
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               418
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 14
               

               Conread position:
               8-719
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 157
               

               Conread position:
               11-525
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               11-574
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               340
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               409
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 61
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               417
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               20-720
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               36-721
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               399
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 39
               

               Conread position:
               36-721
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 174
               

               Conread position:
               38-721
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               408
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               41-721
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 180
               

               Conread position:
               42-559
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               307
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               201, 187
               

               Conread position:
               42-721
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               42-721
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 136
               

               Conread position:
               44-721
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               73-721
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 159
               

               Conread position:
               73-721
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 159
               

               Conread position:
               75-721
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               398
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               75-721
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 10
               

               Conread position:
               78-718
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 87
               

               Conread position:
               81-721
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 90
               

               Conread position:
               84-630
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               338
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               149, 159
               

               Conread position:
               84-720
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 329
               

               Conread position:
               84-721
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               90-720
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               93-699
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               350
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               150, 141
               

               Conread position:
               100-477
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-614
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               301
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               113, 99
               

               Conread position:
               100-702
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 47
               

               Conread position:
               100-720
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 226
               

               Conread position:
               100-721
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-519
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 64
               

               Conread position:
               101-561
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               140, 127
               

               Conread position:
               101-561
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               284
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               101-600
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 64
               

               Conread position:
               101-647
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               328
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               110, 98
               

               Conread position:
               101-702
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               101-702
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               101-710
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               363
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               141, 133
               

               Conread position:
               101-719
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               375
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               116, 137
               

               Conread position:
               101-720
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               101-720
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               101-721
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 64
               

               Conread position:
               101-721
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 152
               

               Conread position:
               101-721
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 233
               

               Conread position:
               104-688
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               104-702
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               369
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               104-720
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               373
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               104-721
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 127
               

               Conread position:
               105-721
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 131
               

               Conread position:
               124-717
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               358
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               162-708
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               188-611
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               213, 223
               

               Conread position:
               189-721
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               325
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               105, 99
               

               Conread position:
               230-721
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               306
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               83, 106
               

               Conread position:
               256-721
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               317, 305
               

               Conread position:
               256-721
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 158
               

               Conread position:
               258-719
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 153
               

               Conread position:
               258-721
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               260-721
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               120, 114
               

               Conread position:
               271-721
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 134
               

               Conread position:
               272-663
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               141, 147
               

               Conread position:
               272-698
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-720
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               307, 293
               

               Conread position:
               272-721
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               272-721
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               40, 63
               

               Conread position:
               272-721
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 293
               

               Conread position:
               272-721
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               273-720
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 141
               

               Conread position:
               282-721
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               119, 123
               

               Conread position:
               287-516
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               112, 118
               

               Conread position:
               292-720
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 98
               

               Conread position:
               293-702
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               281, 267
               

               Conread position:
               293-720
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               375, 389
               

               Conread position:
               293-721
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 112
               

               Conread position:
               318-721
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               257
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               258, 269
               

               Conread position:
               329-721
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               72, 77
               

               Conread position:
               334-708
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               335-708
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               192, 209
               

               Conread position:
               335-721
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               347-708
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               117, 112
               

               Conread position:
               351-720
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               406-721
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               416-721
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               147, 166
               

               Conread position:
               421-721
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               67, 52
               

               Conread position:
               423-721
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               112, 12
               
Show alignments to all cow chromosomes.