Cow genome map
| Conread name: | Ova1-OVRM10205C12 |
| Conread position: | 1-533 |
| Cow position: | chr17:22473401-22473932 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 160 |
| Conread position: | 3-721 |
| Cow position: | chr17:22452396-22451678 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 8-468 |
| Cow position: | chr17:22452055-22451595 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 57 |
| Conread position: | 8-550 |
| Cow position: | chr17:22552022-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 106 |
| Conread position: | 8-554 |
| Cow position: | chr17:22452223-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 338 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 8-708 |
| Cow position: | chr17:22499321-22498621 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 67 |
| Conread position: | 8-712 |
| Cow position: | chr17:22552610-22551906 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 239 |
| Conread position: | 8-720 |
| Cow position: | chr17:22552442-22551730 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 73 |
| Conread position: | 8-721 |
| Cow position: | chr17:22552274-22551561 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 8-721 |
| Cow position: | chr17:22552778-22552065 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 177 |
| Conread position: | 8-721 |
| Cow position: | chr17:22552862-22552149 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 8-721 |
| Cow position: | chr17:22552946-22552233 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 641, 659 |
| Conread position: | 11-609 |
| Cow position: | chr17:22589773-22589175 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 219 |
| Conread position: | 11-718 |
| Cow position: | chr17:22552187-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 75 |
| Conread position: | 11-719 |
| Cow position: | chr17:22552691-22551983 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 67 |
| Conread position: | 11-719 |
| Cow position: | chr17:22590193-22589485 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 11-721 |
| Cow position: | chr17:22552523-22551813 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 11-721 |
| Cow position: | chr17:22590025-22589315 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 403 |
| Conread position: | 15-721 |
| Cow position: | chr17:22553107-22552401 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 19-473 |
| Cow position: | chr17:22452128-22451674 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 23-721 |
| Cow position: | chr17:22590265-22589567 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 111 |
| Conread position: | 36-527 |
| Cow position: | chr17:22589664-22589173 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 305 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 44-719 |
| Cow position: | chr17:22590076-22589401 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 348 |
| Conread position: | 66-720 |
| Cow position: | chr17:22499431-22498777 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 513, 498 |
| Conread position: | 100-707 |
| Cow position: | chr17:22499145-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 84 |
| Conread position: | 100-719 |
| Cow position: | chr17:22499313-22498694 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 85 |
| Conread position: | 104-699 |
| Cow position: | chr17:22473336-22473932 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 315 |
| Conread position: | 151-718 |
| Cow position: | chr17:22553139-22552572 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 155-721 |
| Cow position: | chr17:22452412-22451846 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 176 |
| Conread position: | 170-720 |
| Cow position: | chr17:22590286-22589736 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 243 |
| Conread position: | 188-720 |
| Cow position: | chr17:22473336-22473868 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 217 |
| Conread position: | 197-721 |
| Cow position: | chr17:22473261-22473785 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 75 |
| Conread position: | 211-720 |
| Cow position: | chr17:22553163-22552654 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 21 |
| Conread position: | 257-721 |
| Cow position: | chr17:22590283-22589819 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 159 |
| Conread position: | 286-721 |
| Cow position: | chr17:22473266-22473701 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 278 |
| Conread position: | 293-651 |
| Cow position: | chr17:41441100-41440742 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 227, 242 |
| Conread position: | 315-721 |
| Cow position: | chr17:22553143-22552737 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 315-721 |
| Cow position: | chr17:22590308-22589903 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 6 |
| Conread position: | 334-721 |
| Cow position: | chr17:22499415-22499028 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 399-721 |
| Cow position: | chr17:22590309-22589987 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 87, 75 |
Show alignments to all cow chromosomes.