Cow genome map
| Conread name: | Ova1-OVRM10205C12 |
| Conread position: | 2-696 |
| Cow position: | chr19:23614427-23615117 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 2-721 |
| Cow position: | chr19:23613332-23614052 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 334 |
| Conread position: | 5-719 |
| Cow position: | chr19:23613840-23614554 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 81 |
| Conread position: | 8-706 |
| Cow position: | chr19:14959982-14959300 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 57 |
| Conread position: | 8-708 |
| Cow position: | chr19:23649629-23650329 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 157 |
| Conread position: | 8-720 |
| Cow position: | chr19:23614011-23614723 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-721 |
| Cow position: | chr19:23613423-23614136 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 164 |
| Conread position: | 10-696 |
| Cow position: | chr19:20678028-20678714 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 405 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 50, 65 |
| Conread position: | 11-604 |
| Cow position: | chr19:43570230-43569641 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 365 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 155, 140 |
| Conread position: | 11-606 |
| Cow position: | chr19:14960313-14959722 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 162 |
| Conread position: | 11-678 |
| Cow position: | chr19:14940402-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 11-709 |
| Cow position: | chr19:14940318-14941016 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 470, 460 |
| Conread position: | 11-721 |
| Cow position: | chr19:23613930-23614640 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 11-721 |
| Cow position: | chr19:23614182-23614892 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 11-721 |
| Cow position: | chr19:23649548-23650258 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 16-448 |
| Cow position: | chr19:14959243-14958817 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 154, 123 |
| Conread position: | 19-390 |
| Cow position: | chr19:14948381-14948009 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 19-717 |
| Cow position: | chr19:14940158-14940856 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 382, 386 |
| Conread position: | 19-721 |
| Cow position: | chr19:14940074-14940776 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 23-718 |
| Cow position: | chr19:14959646-14958967 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 407 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 390, 13 |
| Conread position: | 27-699 |
| Cow position: | chr19:23597039-23597711 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 51 |
| Conread position: | 31-618 |
| Cow position: | chr19:20678217-20678801 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 350 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 455, 448 |
| Conread position: | 31-720 |
| Cow position: | chr19:20677713-20678402 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 49 |
| Conread position: | 36-720 |
| Cow position: | chr19:23649741-23650425 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 32 |
| Conread position: | 36-721 |
| Cow position: | chr19:23613619-23614304 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 38-720 |
| Cow position: | chr19:23613789-23614471 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 99 |
| Conread position: | 44-606 |
| Cow position: | chr19:23649917-23650479 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 118 |
| Conread position: | 44-719 |
| Cow position: | chr19:14940267-14940942 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 117 |
| Conread position: | 79-625 |
| Cow position: | chr19:43570246-43569702 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 78 |
| Conread position: | 84-719 |
| Cow position: | chr19:23613751-23614386 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 246 |
| Conread position: | 84-721 |
| Cow position: | chr19:14960408-14959775 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 101 |
| Conread position: | 88-720 |
| Cow position: | chr19:23614427-23615059 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 94-567 |
| Cow position: | chr19:14948473-14948001 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 75 |
| Conread position: | 98-721 |
| Cow position: | chr19:14939985-14940608 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 99-720 |
| Cow position: | chr19:43570384-43569773 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 108 |
| Conread position: | 100-611 |
| Cow position: | chr19:20635550-20635039 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 314 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 145, 153 |
| Conread position: | 101-527 |
| Cow position: | chr19:23614692-23615118 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 143, 130 |
| Conread position: | 101-718 |
| Cow position: | chr19:23596948-23597562 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 36 |
| Conread position: | 101-720 |
| Cow position: | chr19:23649302-23649921 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 313 |
| Conread position: | 101-721 |
| Cow position: | chr19:20677951-20678571 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 104-720 |
| Cow position: | chr19:23613351-23613967 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 288 |
| Conread position: | 105-721 |
| Cow position: | chr19:43570459-43569856 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 130-719 |
| Cow position: | chr19:14960446-14959859 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 69 |
| Conread position: | 152-721 |
| Cow position: | chr19:23649437-23650006 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 496, 514 |
| Conread position: | 159-708 |
| Cow position: | chr19:43570251-43569703 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 255 |
| Conread position: | 171-720 |
| Cow position: | chr19:23613333-23613883 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 235 |
| Conread position: | 171-721 |
| Cow position: | chr19:20677769-20678319 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-716 |
| Cow position: | chr19:20635562-20635018 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 174-707 |
| Cow position: | chr19:14915952-14916470 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 325 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 6 |
| Conread position: | 179-720 |
| Cow position: | chr19:20635639-20635098 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 386 |
| Conread position: | 187-647 |
| Cow position: | chr19:14948465-14948005 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 5, 36 |
| Conread position: | 188-721 |
| Cow position: | chr19:14959649-14959126 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 336 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 191-720 |
| Cow position: | chr19:23596870-23597396 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 166 |
| Conread position: | 243-721 |
| Cow position: | chr19:20635658-20635181 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 5 |
| Conread position: | 252-721 |
| Cow position: | chr19:20677514-20677983 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 168, 161 |
| Conread position: | 256-720 |
| Cow position: | chr19:14959664-14959211 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 413, 13 |
| Conread position: | 257-523 |
| Cow position: | chr19:14959092-14958826 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 264-721 |
| Cow position: | chr19:23596859-23597313 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 292 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 272-721 |
| Cow position: | chr19:23649305-23649754 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 284 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 307, 293 |
| Conread position: | 275-721 |
| Cow position: | chr19:20677453-20677899 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 282 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 122, 139 |
| Conread position: | 281-721 |
| Cow position: | chr19:20678215-20678655 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 283 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 137, 118 |
| Conread position: | 281-721 |
| Cow position: | chr19:23597209-23597649 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-721 |
| Cow position: | chr19:20677639-20678067 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 187, 201 |
| Conread position: | 296-721 |
| Cow position: | chr19:14960448-14960025 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 109 |
| Conread position: | 314-610 |
| Cow position: | chr19:14959119-14958823 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 255, 251 |
| Conread position: | 320-721 |
| Cow position: | chr19:23613315-23613716 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 335-698 |
| Cow position: | chr19:14959176-14958819 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 335-721 |
| Cow position: | chr19:14948484-14948099 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 346-716 |
| Cow position: | chr19:14915955-14916322 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 346-721 |
| Cow position: | chr19:20677440-20677815 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 112, 116 |
| Conread position: | 437-721 |
| Cow position: | chr19:23649302-23649586 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 98 |
| Conread position: | 521-720 |
| Cow position: | chr19:14960475-14960276 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.