Cow genome map

Conread name: Ova1-OVRM10205C12

Conread position: 1-534
Cow position: chr22:46654331-46654864 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 324
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 74

Conread position: 1-625
Cow position: chr22:46654163-46654787 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 376
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 61, 74

Conread position: 2-688
Cow position: chr22:12431251-12430567 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 14

Conread position: 8-720
Cow position: chr22:12499195-12499907 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 67

Conread position: 8-721
Cow position: chr22:14429887-14430600 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 419
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 61, 80

Conread position: 8-721
Cow position: chr22:14430139-14430852 (view UCSC Genome Browser custom track)
Alignm length: 723
Alignm identity: 411
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 55

Conread position: 11-444
Cow position: chr22:12475725-12475292 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 271
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 226, 232

Conread position: 11-444
Cow position: chr22:12499534-12499967 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 268
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 11-445
Cow position: chr22:12399180-12398746 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 263
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 64

Conread position: 11-526
Cow position: chr22:12399264-12398749 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 313
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 58, 44

Conread position: 11-533
Cow position: chr22:11640934-11641454 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 313
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 72, 52

Conread position: 11-600
Cow position: chr22:12399348-12398759 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 224

Conread position: 11-609
Cow position: chr22:12385508-12384908 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 61

Conread position: 11-720
Cow position: chr22:12399768-12399059 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 64

Conread position: 11-720
Cow position: chr22:12431580-12430871 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 52

Conread position: 11-720
Cow position: chr22:12432252-12431543 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 64

Conread position: 11-720
Cow position: chr22:12476229-12475520 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 42

Conread position: 11-720
Cow position: chr22:12498946-12499655 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 218

Conread position: 11-720
Cow position: chr22:12499030-12499739 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 42

Conread position: 11-721
Cow position: chr22:12399684-12398974 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 64

Conread position: 11-721
Cow position: chr22:12458532-12457822 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 64

Conread position: 19-619
Cow position: chr22:11640858-11641458 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 367
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 151, 142

Conread position: 22-613
Cow position: chr22:12458353-12457760 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 370
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 184, 163

Conread position: 22-720
Cow position: chr22:12476386-12475688 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 393

Conread position: 23-561
Cow position: chr22:12419023-12418485 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 312
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 46, 52

Conread position: 28-393
Cow position: chr22:11701278-11701643 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 220
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 35

Conread position: 31-611
Cow position: chr22:12475873-12475293 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 379

Conread position: 31-611
Cow position: chr22:12499386-12499966 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 374

Conread position: 31-719
Cow position: chr22:12431308-12430620 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 31-721
Cow position: chr22:12476041-12475351 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 44

Conread position: 36-365
Cow position: chr22:12475616-12475287 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 205
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 36-365
Cow position: chr22:12499643-12499972 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 28

Conread position: 36-526
Cow position: chr22:12385397-12384907 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 303
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 134, 129

Conread position: 36-532
Cow position: chr22:12475784-12475288 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 295

Conread position: 36-721
Cow position: chr22:11640707-11641392 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 105

Conread position: 38-719
Cow position: chr22:12476118-12475437 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 123

Conread position: 39-689
Cow position: chr22:12399404-12398754 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 39-698
Cow position: chr22:12475949-12475290 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 42-698
Cow position: chr22:12499313-12499969 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 21

Conread position: 42-721
Cow position: chr22:12432053-12431374 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 33

Conread position: 44-719
Cow position: chr22:12399567-12398892 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 74-561
Cow position: chr22:11666418-11666905 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 299
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 123

Conread position: 74-697
Cow position: chr22:11701072-11701695 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 378
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 132, 123

Conread position: 81-721
Cow position: chr22:12431678-12431038 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 323

Conread position: 81-721
Cow position: chr22:12432266-12431626 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 241

Conread position: 83-721
Cow position: chr22:12419316-12418661 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 374
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 220, 345

Conread position: 83-721
Cow position: chr22:12458628-12457990 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 152

Conread position: 84-720
Cow position: chr22:12399443-12398807 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 70

Conread position: 84-720
Cow position: chr22:12498935-12499571 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 327

Conread position: 84-721
Cow position: chr22:12385603-12384964 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 50

Conread position: 93-721
Cow position: chr22:46654087-46654715 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 388
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 22, 36

Conread position: 100-512
Cow position: chr22:12418862-12418450 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 242
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 404, 398

Conread position: 100-532
Cow position: chr22:12499539-12499971 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 272
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 223, 231

Conread position: 100-721
Cow position: chr22:12432331-12431710 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 61

Conread position: 100-721
Cow position: chr22:12432415-12431794 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 73

Conread position: 101-720
Cow position: chr22:12476223-12475604 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 312

Conread position: 105-719
Cow position: chr22:12498872-12499486 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 105-721
Cow position: chr22:12476387-12475771 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 300

Conread position: 119-694
Cow position: chr22:12419011-12418434 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 124

Conread position: 119-719
Cow position: chr22:12385652-12385050 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 42

Conread position: 119-721
Cow position: chr22:12399906-12399310 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 38

Conread position: 125-720
Cow position: chr22:12399822-12399227 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 362, 350

Conread position: 132-708
Cow position: chr22:46653957-46654534 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 363
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 10, 98

Conread position: 140-720
Cow position: chr22:12432459-12431879 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 21

Conread position: 142-720
Cow position: chr22:12385713-12385133 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 527

Conread position: 173-708
Cow position: chr22:14429800-14430335 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 324
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 18, 26

Conread position: 189-708
Cow position: chr22:12419024-12418506 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 9

Conread position: 210-720
Cow position: chr22:12498893-12499403 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 439, 456

Conread position: 230-721
Cow position: chr22:12385709-12385216 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 189

Conread position: 252-720
Cow position: chr22:14429795-14430263 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 251

Conread position: 254-713
Cow position: chr22:14430469-14430928 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 275
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 158, 146

Conread position: 255-721
Cow position: chr22:14468043-14468509 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 294
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 58

Conread position: 256-717
Cow position: chr22:14467960-14468421 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 278
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 151, 136

Conread position: 258-721
Cow position: chr22:12476402-12475939 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 212

Conread position: 258-721
Cow position: chr22:12498857-12499320 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 210

Conread position: 263-645
Cow position: chr22:14442288-14442667 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 226
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 296, 0

Conread position: 274-720
Cow position: chr22:12419024-12418578 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 136

Conread position: 275-708
Cow position: chr22:12432492-12432059 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 273
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 275-721
Cow position: chr22:14429650-14430096 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 278
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 183, 187

Conread position: 286-719
Cow position: chr22:14429498-14429926 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 271
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 146, 13

Conread position: 293-721
Cow position: chr22:11666469-11666897 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 266
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 106, 122

Conread position: 293-721
Cow position: chr22:11701207-11701635 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 275
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 97, 112

Conread position: 335-720
Cow position: chr22:12498850-12499235 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 70

Conread position: 335-721
Cow position: chr22:12476409-12476023 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 70

Conread position: 335-721
Cow position: chr22:14467955-14468341 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 241
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 57

Conread position: 344-720
Cow position: chr22:46654002-46654378 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 75, 47

Conread position: 344-720
Cow position: chr22:46654422-46654798 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 246
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 46, 77

Conread position: 354-720
Cow position: chr22:12432497-12432131 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 234
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 30

Conread position: 357-721
Cow position: chr22:12399920-12399562 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 52, 62

Conread position: 364-721
Cow position: chr22:11666456-11666813 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 227
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 26

Conread position: 364-721
Cow position: chr22:11701110-11701467 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 224
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 26

Conread position: 447-721
Cow position: chr22:11640614-11640888 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 88, 73

Show alignments to all cow chromosomes.