Cow genome map


           Conread name:
           Ova1-OVRM10205C12
        

               Conread position:
               1-534
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               324
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               68, 74
               

               Conread position:
               1-625
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               376
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               61, 74
               

               Conread position:
               2-688
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 14
               

               Conread position:
               8-720
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               8-721
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               419
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               61, 80
               

               Conread position:
               8-721
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               411
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               11-444
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               226, 232
               

               Conread position:
               11-444
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-445
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               57, 64
               

               Conread position:
               11-526
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               58, 44
               

               Conread position:
               11-533
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               313
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               72, 52
               

               Conread position:
               11-600
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 224
               

               Conread position:
               11-609
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 52
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 218
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 64
               

               Conread position:
               19-619
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               367
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               151, 142
               

               Conread position:
               22-613
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               370
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               184, 163
               

               Conread position:
               22-720
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               374, 393
               

               Conread position:
               23-561
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               312
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               28-393
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 35
               

               Conread position:
               31-611
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               359, 379
               

               Conread position:
               31-611
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               358, 374
               

               Conread position:
               31-719
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 32
               

               Conread position:
               31-721
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               36-365
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               36-365
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 28
               

               Conread position:
               36-526
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               303
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               134, 129
               

               Conread position:
               36-532
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 295
               

               Conread position:
               36-721
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 105
               

               Conread position:
               38-719
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 123
               

               Conread position:
               39-689
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               39-698
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               42-698
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               42-721
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 33
               

               Conread position:
               44-719
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               74-561
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               132, 123
               

               Conread position:
               74-697
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               378
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               132, 123
               

               Conread position:
               81-721
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               315, 323
               

               Conread position:
               81-721
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 241
               

               Conread position:
               83-721
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               374
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               220, 345
               

               Conread position:
               83-721
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 152
               

               Conread position:
               84-720
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 70
               

               Conread position:
               84-720
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 327
               

               Conread position:
               84-721
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               93-721
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               388
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               100-512
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               404, 398
               

               Conread position:
               100-532
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               223, 231
               

               Conread position:
               100-721
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               100-721
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               101-720
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 312
               

               Conread position:
               105-719
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-721
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 300
               

               Conread position:
               119-694
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 124
               

               Conread position:
               119-719
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               119-721
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               125-720
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               362, 350
               

               Conread position:
               132-708
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               363
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               140-720
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               142-720
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 527
               

               Conread position:
               173-708
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               324
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               189-708
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               210-720
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               439, 456
               

               Conread position:
               230-721
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 189
               

               Conread position:
               252-720
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 251
               

               Conread position:
               254-713
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               158, 146
               

               Conread position:
               255-721
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               256-717
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               151, 136
               

               Conread position:
               258-721
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 212
               

               Conread position:
               258-721
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 210
               

               Conread position:
               263-645
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               296, 0
               

               Conread position:
               274-720
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 136
               

               Conread position:
               275-708
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               275-721
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               183, 187
               

               Conread position:
               286-719
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               146, 13
               

               Conread position:
               293-721
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               106, 122
               

               Conread position:
               293-721
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               97, 112
               

               Conread position:
               335-720
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 70
               

               Conread position:
               335-721
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               335-721
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               344-720
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               75, 47
               

               Conread position:
               344-720
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               46, 77
               

               Conread position:
               354-720
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               357-721
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               52, 62
               

               Conread position:
               364-721
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               364-721
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 26
               

               Conread position:
               447-721
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               88, 73
               
Show alignments to all cow chromosomes.