Cow genome map
| Conread name: | Ova1-OVRM10205C12 |
| Conread position: | 1-527 |
| Cow position: | chr23:24547180-24546654 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-615 |
| Cow position: | chr23:24560733-24560126 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 8-444 |
| Cow position: | chr23:24639625-24640061 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 166, 157 |
| Conread position: | 9-721 |
| Cow position: | chr23:24522576-24521864 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 447 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 11-379 |
| Cow position: | chr23:24626384-24626750 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 130, 124 |
| Conread position: | 11-516 |
| Cow position: | chr23:24535969-24535464 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 66, 97 |
| Conread position: | 11-561 |
| Cow position: | chr23:24547254-24546704 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 11-721 |
| Cow position: | chr23:25626274-25626981 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 28-615 |
| Cow position: | chr23:25626459-25627043 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 355 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 36-478 |
| Cow position: | chr23:25698555-25698113 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 50 |
| Conread position: | 36-603 |
| Cow position: | chr23:25660168-25660735 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 350 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 207, 191 |
| Conread position: | 38-447 |
| Cow position: | chr23:24626327-24626736 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-478 |
| Cow position: | chr23:24654053-24654486 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 102, 93 |
| Conread position: | 39-721 |
| Cow position: | chr23:24639236-24639918 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 84-646 |
| Cow position: | chr23:24547265-24546703 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 321 |
| Conread position: | 84-679 |
| Cow position: | chr23:25698675-25698080 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 350 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 328, 321 |
| Conread position: | 85-721 |
| Cow position: | chr23:25625929-25626564 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 371 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 168, 16 |
| Conread position: | 88-647 |
| Cow position: | chr23:24535976-24535416 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 500, 489 |
| Conread position: | 95-689 |
| Cow position: | chr23:25660143-25660737 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 100-721 |
| Cow position: | chr23:24560809-24560188 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 68 |
| Conread position: | 101-525 |
| Cow position: | chr23:24639634-24640058 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 101-721 |
| Cow position: | chr23:25626196-25626813 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 0 |
| Conread position: | 103-720 |
| Cow position: | chr23:24522815-24522203 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 28 |
| Conread position: | 103-720 |
| Cow position: | chr23:25626028-25626644 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 378 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 28, 21 |
| Conread position: | 104-632 |
| Cow position: | chr23:24639553-24640081 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 104-684 |
| Cow position: | chr23:24522567-24521972 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 363 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 393, 560 |
| Conread position: | 107-700 |
| Cow position: | chr23:24536041-24535448 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 58 |
| Conread position: | 107-720 |
| Cow position: | chr23:24639388-24640001 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 114-525 |
| Cow position: | chr23:24654044-24654455 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 114-721 |
| Cow position: | chr23:24547319-24546712 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 119 |
| Conread position: | 118-720 |
| Cow position: | chr23:24639231-24639833 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 197 |
| Conread position: | 119-696 |
| Cow position: | chr23:24560706-24560129 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 119-708 |
| Cow position: | chr23:24639484-24640073 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 360 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 124-490 |
| Cow position: | chr23:25724106-25723740 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 145-720 |
| Cow position: | chr23:24522610-24522020 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 364 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 182, 191 |
| Conread position: | 188-721 |
| Cow position: | chr23:24560889-24560356 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-626 |
| Cow position: | chr23:24626312-24626745 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 210-600 |
| Cow position: | chr23:25724104-25723714 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 180, 195 |
| Conread position: | 210-702 |
| Cow position: | chr23:24536022-24535530 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 450, 438 |
| Conread position: | 212-681 |
| Cow position: | chr23:24654058-24654521 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 288 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 191, 178 |
| Conread position: | 224-721 |
| Cow position: | chr23:25660188-25660685 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 187 |
| Conread position: | 256-720 |
| Cow position: | chr23:25626015-25626479 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 148 |
| Conread position: | 258-720 |
| Cow position: | chr23:25698820-25698375 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 230, 26 |
| Conread position: | 261-718 |
| Cow position: | chr23:25625937-25626393 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 268-721 |
| Cow position: | chr23:24547333-24546880 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-701 |
| Cow position: | chr23:25698655-25698226 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 48, 43 |
| Conread position: | 272-721 |
| Cow position: | chr23:24560889-24560440 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 274-721 |
| Cow position: | chr23:24536042-24535595 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-721 |
| Cow position: | chr23:24639225-24639666 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 281 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 115, 133 |
| Conread position: | 281-619 |
| Cow position: | chr23:24654043-24654381 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 274 |
| Conread position: | 287-708 |
| Cow position: | chr23:24626324-24626743 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 0 |
| Conread position: | 292-684 |
| Cow position: | chr23:25724106-25723714 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 112 |
| Conread position: | 295-720 |
| Cow position: | chr23:24626251-24626673 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 316-721 |
| Cow position: | chr23:24626197-24626590 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 335-645 |
| Cow position: | chr23:25698676-25698366 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 350-719 |
| Cow position: | chr23:24536050-24535681 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-721 |
| Cow position: | chr23:25660146-25660517 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 355-721 |
| Cow position: | chr23:24560890-24560524 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 29, 50 |
| Conread position: | 364-707 |
| Cow position: | chr23:24654042-24654385 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-710 |
| Cow position: | chr23:25724106-25723772 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 416-720 |
| Cow position: | chr23:24547353-24547049 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-721 |
| Cow position: | chr23:24560913-24560608 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-720 |
| Cow position: | chr23:24536057-24535764 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 440-721 |
| Cow position: | chr23:24522814-24522538 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 244, 24 |
| Conread position: | 455-721 |
| Cow position: | chr23:25724111-25723845 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 28, 15 |
Show alignments to all cow chromosomes.