Cow genome map
| Conread name: | Ova1-OVRM10205C12 |
| Conread position: | 3-541 |
| Cow position: | chr24:17035555-17035017 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 332 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 11-449 |
| Cow position: | chr24:17035379-17034940 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 47 |
| Conread position: | 11-699 |
| Cow position: | chr24:17035715-17035027 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 11-708 |
| Cow position: | chr24:17036135-17035438 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 304 |
| Conread position: | 11-718 |
| Cow position: | chr24:17036303-17035596 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 11-720 |
| Cow position: | chr24:17035883-17035174 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 222 |
| Conread position: | 11-721 |
| Cow position: | chr24:17035967-17035257 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 155 |
| Conread position: | 14-692 |
| Cow position: | chr24:17070369-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 75 |
| Conread position: | 22-613 |
| Cow position: | chr24:17078091-17077500 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 211 |
| Conread position: | 22-718 |
| Cow position: | chr24:17036544-17035848 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 375, 363 |
| Conread position: | 38-720 |
| Cow position: | chr24:17078243-17077561 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 161 |
| Conread position: | 39-721 |
| Cow position: | chr24:17036359-17035677 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-382 |
| Cow position: | chr24:17013188-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 126, 118 |
| Conread position: | 44-452 |
| Cow position: | chr24:17070651-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 92, 97 |
| Conread position: | 49-702 |
| Cow position: | chr24:17036432-17035780 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 8 |
| Conread position: | 84-532 |
| Cow position: | chr24:17035390-17034943 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 90, 77 |
| Conread position: | 100-620 |
| Cow position: | chr24:17035542-17035022 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 465, 488 |
| Conread position: | 100-717 |
| Cow position: | chr24:17036130-17035513 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-720 |
| Cow position: | chr24:17078265-17077645 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 139 |
| Conread position: | 101-708 |
| Cow position: | chr24:17035709-17035102 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 304 |
| Conread position: | 101-714 |
| Cow position: | chr24:17078096-17077484 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 138 |
| Conread position: | 102-721 |
| Cow position: | chr24:17036548-17035929 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 104-466 |
| Cow position: | chr24:17013166-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 241-721 |
| Cow position: | chr24:17078377-17077896 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 225 |
| Conread position: | 242-582 |
| Cow position: | chr24:17013218-17013558 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 322, 297 |
| Conread position: | 256-720 |
| Cow position: | chr24:17070443-17070907 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 148 |
| Conread position: | 256-721 |
| Cow position: | chr24:17070527-17070992 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 303 |
| Conread position: | 273-498 |
| Cow position: | chr24:16986431-16986656 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 138 |
| Conread position: | 275-609 |
| Cow position: | chr24:17013167-17013501 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 124, 136 |
| Conread position: | 286-720 |
| Cow position: | chr24:17070389-17070823 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 24 |
| Conread position: | 339-714 |
| Cow position: | chr24:17013147-17013521 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 356, 0 |
| Conread position: | 408-721 |
| Cow position: | chr24:17070428-17070740 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 422-645 |
| Cow position: | chr24:16986412-16986635 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 152, 130 |
| Conread position: | 438-720 |
| Cow position: | chr24:17070372-17070655 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 438-721 |
| Cow position: | chr24:17013162-17013445 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 135, 127 |
Show alignments to all cow chromosomes.