Cow genome map


           Conread name:
           Ova1-OVRM10205C12
        

               Conread position:
               2-720
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 12
               

               Conread position:
               8-388
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               377, 0
               

               Conread position:
               8-647
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               380
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               52, 78
               

               Conread position:
               8-708
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 157
               

               Conread position:
               8-720
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-721
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 327
               

               Conread position:
               8-721
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-721
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 71
               

               Conread position:
               9-708
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               9-721
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-357
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-639
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 232
               

               Conread position:
               11-647
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 54
               

               Conread position:
               11-707
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 154
               

               Conread position:
               11-719
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 222
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 220
               

               Conread position:
               14-516
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               317
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               156, 143
               

               Conread position:
               16-628
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               367, 387
               

               Conread position:
               16-721
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 63
               

               Conread position:
               22-633
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               369
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               121, 115
               

               Conread position:
               36-719
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               36-721
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 129
               

               Conread position:
               37-573
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               364, 376
               

               Conread position:
               42-713
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               42-720
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               402
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 27
               

               Conread position:
               44-543
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               44-720
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 121
               

               Conread position:
               74-713
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 91
               

               Conread position:
               74-721
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 91
               

               Conread position:
               88-611
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               142, 210
               

               Conread position:
               99-721
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 66
               

               Conread position:
               100-613
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 65
               

               Conread position:
               101-721
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 39
               

               Conread position:
               102-617
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               325
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               277, 210
               

               Conread position:
               104-465
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               331, 0
               

               Conread position:
               104-715
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               364
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               108, 78
               

               Conread position:
               105-719
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               382
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               75, 99
               

               Conread position:
               106-721
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 125
               

               Conread position:
               111-561
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               285, 303
               

               Conread position:
               111-617
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               114-624
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               56, 51
               

               Conread position:
               118-719
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               373
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 19
               

               Conread position:
               118-720
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               124-684
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 295
               

               Conread position:
               132-720
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               441, 433
               

               Conread position:
               146-721
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               348
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               169-700
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               324
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               229, 103
               

               Conread position:
               169-702
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 74
               

               Conread position:
               185-707
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               201-719
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 218
               

               Conread position:
               210-711
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 195
               

               Conread position:
               210-721
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 199
               

               Conread position:
               234-721
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               242-721
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               316
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               153, 163
               

               Conread position:
               256-531
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               256-721
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               260-721
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 145
               

               Conread position:
               263-720
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 89
               

               Conread position:
               272-647
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               124, 141
               

               Conread position:
               272-720
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               272-721
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               129, 148
               

               Conread position:
               282-675
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 132
               

               Conread position:
               286-720
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               287-721
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               292-721
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-720
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               93, 73
               

               Conread position:
               326-721
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               71, 87
               

               Conread position:
               326-721
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               121, 110
               

               Conread position:
               328-721
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 25
               

               Conread position:
               338-720
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               347-720
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               347-720
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 5
               

               Conread position:
               354-720
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               356-637
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               356-719
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               41, 54
               

               Conread position:
               374-721
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 48
               

               Conread position:
               406-720
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               126, 5
               

               Conread position:
               413-637
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               413-721
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               439-720
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               439-721
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               440-721
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               443-721
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               467-720
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 66
               
Show alignments to all cow chromosomes.