Cow genome map
| Conread name: | Ova1-OVRM10205C12 |
| Conread position: | 5-374 |
| Cow position: | chr28:7810576-7810945 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 138, 132 |
| Conread position: | 5-721 |
| Cow position: | chr28:7757401-7758117 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 387 |
| Conread position: | 8-399 |
| Cow position: | chr28:9253259-9253651 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 350, 0 |
| Conread position: | 8-476 |
| Cow position: | chr28:9290160-9290622 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 391, 47 |
| Conread position: | 8-519 |
| Cow position: | chr28:9253091-9253602 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 223 |
| Conread position: | 8-626 |
| Cow position: | chr28:7810336-7810945 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 50 |
| Conread position: | 8-684 |
| Cow position: | chr28:7757656-7758332 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 8-714 |
| Cow position: | chr28:7758076-7758766 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 8-721 |
| Cow position: | chr28:7757908-7758605 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 399 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 652, 393 |
| Conread position: | 9-721 |
| Cow position: | chr28:7757573-7758285 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 78 |
| Conread position: | 11-720 |
| Cow position: | chr28:7757491-7758200 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 22-512 |
| Cow position: | chr28:9299223-9299710 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 199, 216 |
| Conread position: | 39-708 |
| Cow position: | chr28:7810283-7810943 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 528, 245 |
| Conread position: | 44-721 |
| Cow position: | chr28:9299008-9299667 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 30 |
| Conread position: | 70-721 |
| Cow position: | chr28:9252900-9253552 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 74-651 |
| Cow position: | chr28:9253073-9253651 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 84 |
| Conread position: | 74-721 |
| Cow position: | chr28:9289971-9290615 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 100-718 |
| Cow position: | chr28:11334141-11333523 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 143 |
| Conread position: | 101-696 |
| Cow position: | chr28:9253016-9253611 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 64 |
| Conread position: | 101-708 |
| Cow position: | chr28:9298564-9299167 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 117 |
| Conread position: | 104-691 |
| Cow position: | chr28:7758324-7758911 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 501, 453 |
| Conread position: | 107-719 |
| Cow position: | chr28:11333966-11333360 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 367 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 110, 124 |
| Conread position: | 119-721 |
| Cow position: | chr28:34695927-34696529 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 359 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 124-721 |
| Cow position: | chr28:7757190-7757781 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 124-721 |
| Cow position: | chr28:7757352-7757949 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 147-721 |
| Cow position: | chr28:9252893-9253468 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 188-696 |
| Cow position: | chr28:7758324-7758831 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 225 |
| Conread position: | 201-686 |
| Cow position: | chr28:34679547-34679070 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 306 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 242-719 |
| Cow position: | chr28:11334167-11333690 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 143, 151 |
| Conread position: | 249-721 |
| Cow position: | chr28:34695889-34696361 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 289 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 108, 104 |
| Conread position: | 250-720 |
| Cow position: | chr28:34695722-34696192 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 78, 88 |
| Conread position: | 256-721 |
| Cow position: | chr28:9298302-9298763 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 7 |
| Conread position: | 262-719 |
| Cow position: | chr28:11334231-11333774 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 41, 61 |
| Conread position: | 269-661 |
| Cow position: | chr28:33210225-33210618 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 292-721 |
| Cow position: | chr28:7810284-7810704 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 98 |
| Conread position: | 293-704 |
| Cow position: | chr28:34673376-34673787 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 116 |
| Conread position: | 314-708 |
| Cow position: | chr28:34679600-34679205 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 356-720 |
| Cow position: | chr28:33210228-33210593 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 434-720 |
| Cow position: | chr28:9298561-9298845 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 105 |
Show alignments to all cow chromosomes.