Cow genome map
| Conread name: | Ova1-OVRM10205C12 |
| Conread position: | 1-645 |
| Cow position: | chr7:8243451-8244092 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 378 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 1-720 |
| Cow position: | chr7:8324882-8325601 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 443 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 76, 85 |
| Conread position: | 1-721 |
| Cow position: | chr7:8325386-8326106 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 442 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 2-492 |
| Cow position: | chr7:1439792-1440278 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 2-720 |
| Cow position: | chr7:1014257-1014967 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 8 |
| Conread position: | 2-721 |
| Cow position: | chr7:8325303-8326022 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 432 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 4-361 |
| Cow position: | chr7:3180521-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 316, 280 |
| Conread position: | 4-721 |
| Cow position: | chr7:1014342-1015052 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 7 |
| Conread position: | 5-502 |
| Cow position: | chr7:1438234-1438731 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 78 |
| Conread position: | 5-574 |
| Cow position: | chr7:1439710-1440276 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 59 |
| Conread position: | 8-361 |
| Cow position: | chr7:42878616-42878263 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-399 |
| Cow position: | chr7:1438321-1438712 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 8-720 |
| Cow position: | chr7:42879120-42878408 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-407 |
| Cow position: | chr7:1015098-1015496 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 153, 126 |
| Conread position: | 11-561 |
| Cow position: | chr7:18390237-18390787 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 332 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 156, 136 |
| Conread position: | 11-611 |
| Cow position: | chr7:3180276-3180875 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 157 |
| Conread position: | 11-686 |
| Cow position: | chr7:42878949-42878274 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 225, 219 |
| Conread position: | 11-696 |
| Cow position: | chr7:3180108-3180793 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 11-699 |
| Cow position: | chr7:1014762-1015450 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 231 |
| Conread position: | 11-717 |
| Cow position: | chr7:11601112-11600411 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 144 |
| Conread position: | 11-720 |
| Cow position: | chr7:3179772-3180481 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 11-721 |
| Cow position: | chr7:3179940-3180650 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 11-721 |
| Cow position: | chr7:3180024-3180734 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 381 |
| Conread position: | 11-721 |
| Cow position: | chr7:42879033-42878323 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 651, 656 |
| Conread position: | 14-651 |
| Cow position: | chr7:18390156-18390793 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 215 |
| Conread position: | 14-721 |
| Cow position: | chr7:1439548-1440255 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 41 |
| Conread position: | 19-720 |
| Cow position: | chr7:11601188-11600487 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 22-720 |
| Cow position: | chr7:42879274-42878576 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 29-721 |
| Cow position: | chr7:18390003-18390695 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 36 |
| Conread position: | 36-488 |
| Cow position: | chr7:18390346-18390798 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 267 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 138, 129 |
| Conread position: | 38-721 |
| Cow position: | chr7:42879342-42878659 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 44-719 |
| Cow position: | chr7:3179889-3180564 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 122 |
| Conread position: | 44-721 |
| Cow position: | chr7:3179721-3180398 (view UCSC Genome Browser custom track) |
| Alignm length: | 683 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 134 |
| Conread position: | 44-721 |
| Cow position: | chr7:42879168-42878491 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 370 |
| Conread position: | 78-721 |
| Cow position: | chr7:1014745-1015388 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 101-721 |
| Cow position: | chr7:8277425-8278045 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 377 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 51 |
| Conread position: | 101-721 |
| Cow position: | chr7:11601190-11600570 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 103-721 |
| Cow position: | chr7:18390161-18390779 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 302 |
| Conread position: | 105-721 |
| Cow position: | chr7:1014688-1015304 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 118-721 |
| Cow position: | chr7:3179711-3180314 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 115 |
| Conread position: | 119-714 |
| Cow position: | chr7:1438098-1438691 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 457, 132 |
| Conread position: | 121-719 |
| Cow position: | chr7:42879343-42878745 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 79 |
| Conread position: | 164-708 |
| Cow position: | chr7:1439446-1439990 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 144 |
| Conread position: | 169-707 |
| Cow position: | chr7:8277913-8278451 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 323 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 171-721 |
| Cow position: | chr7:8243034-8243583 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 341 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 52, 97 |
| Conread position: | 171-721 |
| Cow position: | chr7:8277747-8278297 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 340 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 252, 221 |
| Conread position: | 188-721 |
| Cow position: | chr7:1014273-1014800 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 217 |
| Conread position: | 193-720 |
| Cow position: | chr7:18389999-18390526 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 207 |
| Conread position: | 256-720 |
| Cow position: | chr7:1439454-1439919 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 134 |
| Conread position: | 256-721 |
| Cow position: | chr7:11601203-11600738 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 79 |
| Conread position: | 257-721 |
| Cow position: | chr7:8243455-8243919 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 288 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 261-708 |
| Cow position: | chr7:8277921-8278368 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 262-699 |
| Cow position: | chr7:8242873-8243310 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 298, 317 |
| Conread position: | 264-720 |
| Cow position: | chr7:8324726-8325181 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 286 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 272-720 |
| Cow position: | chr7:8277260-8277708 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 272-721 |
| Cow position: | chr7:8324817-8325266 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 135, 120 |
| Conread position: | 274-720 |
| Cow position: | chr7:42879442-42878996 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 115 |
| Conread position: | 281-647 |
| Cow position: | chr7:8325750-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 245 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 109, 127 |
| Conread position: | 293-586 |
| Cow position: | chr7:1438438-1438731 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 10, 22 |
| Conread position: | 314-699 |
| Cow position: | chr7:1014231-1014616 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 251 |
| Conread position: | 332-604 |
| Cow position: | chr7:11434511-11434239 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 332-721 |
| Cow position: | chr7:8242859-8243248 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 335-720 |
| Cow position: | chr7:11601208-11600823 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 361-721 |
| Cow position: | chr7:1438088-1438446 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 365-721 |
| Cow position: | chr7:3179706-3180062 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 438-721 |
| Cow position: | chr7:11601272-11600990 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 46 |
| Conread position: | 508-721 |
| Cow position: | chr7:1014257-1014470 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 152, 158 |
Show alignments to all cow chromosomes.