Cow genome map


           Conread name:
           Ova1-OVRM10205C12
        

               Conread position:
               1-645
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               378
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 85
               

               Conread position:
               1-720
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               443
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               76, 85
               

               Conread position:
               1-721
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               442
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               59, 83
               

               Conread position:
               2-492
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               2-720
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 8
               

               Conread position:
               2-721
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               432
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               4-361
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               316, 280
               

               Conread position:
               4-721
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 7
               

               Conread position:
               5-502
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               5-574
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               8-361
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-399
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               244
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               8-720
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-407
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               153, 126
               

               Conread position:
               11-561
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               332
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               156, 136
               

               Conread position:
               11-611
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 157
               

               Conread position:
               11-686
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 219
               

               Conread position:
               11-696
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               11-699
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 231
               

               Conread position:
               11-717
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 144
               

               Conread position:
               11-720
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 150
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               392, 381
               

               Conread position:
               11-721
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               651, 656
               

               Conread position:
               14-651
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 215
               

               Conread position:
               14-721
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 41
               

               Conread position:
               19-720
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               22-720
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               29-721
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               36-488
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               267
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               138, 129
               

               Conread position:
               38-721
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               44-719
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 122
               

               Conread position:
               44-721
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 134
               

               Conread position:
               44-721
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 370
               

               Conread position:
               78-721
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 74
               

               Conread position:
               101-721
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               377
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 51
               

               Conread position:
               101-721
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 64
               

               Conread position:
               103-721
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 302
               

               Conread position:
               105-721
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               118-721
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 115
               

               Conread position:
               119-714
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               457, 132
               

               Conread position:
               121-719
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 79
               

               Conread position:
               164-708
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 144
               

               Conread position:
               169-707
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               323
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               90, 67
               

               Conread position:
               171-721
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               341
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               52, 97
               

               Conread position:
               171-721
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               340
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               252, 221
               

               Conread position:
               188-721
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 217
               

               Conread position:
               193-720
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 207
               

               Conread position:
               256-720
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 134
               

               Conread position:
               256-721
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               257-721
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               261-708
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               262-699
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               298, 317
               

               Conread position:
               264-720
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               272-720
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 47
               

               Conread position:
               272-721
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               135, 120
               

               Conread position:
               274-720
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 115
               

               Conread position:
               281-647
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               109, 127
               

               Conread position:
               293-586
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               314-699
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 251
               

               Conread position:
               332-604
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               332-721
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               335-720
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               72, 85
               

               Conread position:
               361-721
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               365-721
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               438-721
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               131, 46
               

               Conread position:
               508-721
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               152, 158
               
Show alignments to all cow chromosomes.