Cow genome map
| Conread name: | Ova1-OVRM10205C12 |
| Conread position: | 1-720 |
| Cow position: | chr8:45201083-45201802 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 136 |
| Conread position: | 2-719 |
| Cow position: | chr8:45201002-45201717 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 20 |
| Conread position: | 2-720 |
| Cow position: | chr8:46816113-46816829 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 3-708 |
| Cow position: | chr8:48407059-48406354 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 162 |
| Conread position: | 3-721 |
| Cow position: | chr8:46815857-46816578 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 3-721 |
| Cow position: | chr8:46816028-46816746 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-721 |
| Cow position: | chr8:46816448-46817166 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 167 |
| Conread position: | 8-588 |
| Cow position: | chr8:45201426-45202006 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 411, 405 |
| Conread position: | 8-708 |
| Cow position: | chr8:45201174-45201874 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 129 |
| Conread position: | 8-720 |
| Cow position: | chr8:48407222-48406510 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 11-526 |
| Cow position: | chr8:46816876-46817391 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-526 |
| Cow position: | chr8:55581233-55581748 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 64 |
| Conread position: | 11-689 |
| Cow position: | chr8:46816708-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 11-690 |
| Cow position: | chr8:45201261-45201940 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-720 |
| Cow position: | chr8:46816204-46816913 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 11-720 |
| Cow position: | chr8:46816540-46817249 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 577, 564 |
| Conread position: | 11-720 |
| Cow position: | chr8:48407555-48406846 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 11-721 |
| Cow position: | chr8:46816624-46817334 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 11-721 |
| Cow position: | chr8:48407303-48406593 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 407 |
| Conread position: | 11-721 |
| Cow position: | chr8:48407387-48406677 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 64 |
| Conread position: | 21-720 |
| Cow position: | chr8:45200935-45201634 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 23-647 |
| Cow position: | chr8:55581077-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 394 |
| Conread position: | 28-714 |
| Cow position: | chr8:48407454-48406768 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 290 |
| Conread position: | 36-719 |
| Cow position: | chr8:48406942-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 417 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 36-721 |
| Cow position: | chr8:55580922-55581607 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 39-717 |
| Cow position: | chr8:55581009-55581687 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 44-600 |
| Cow position: | chr8:55581182-55581738 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 337 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 351, 361 |
| Conread position: | 44-720 |
| Cow position: | chr8:55580846-55581522 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 153 |
| Conread position: | 44-721 |
| Cow position: | chr8:46816321-46816998 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 74-721 |
| Cow position: | chr8:46816435-46817082 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 100-721 |
| Cow position: | chr8:48407550-48406929 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 231 |
| Conread position: | 104-720 |
| Cow position: | chr8:48407630-48407014 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 50 |
| Conread position: | 114-721 |
| Cow position: | chr8:46815884-46816494 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 202 |
| Conread position: | 118-721 |
| Cow position: | chr8:45200948-45201551 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 200 |
| Conread position: | 169-721 |
| Cow position: | chr8:46815612-46816158 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 174 |
| Conread position: | 188-721 |
| Cow position: | chr8:48407630-48407097 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 216 |
| Conread position: | 210-607 |
| Cow position: | chr8:6958058-6957661 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 186, 203 |
| Conread position: | 228-708 |
| Cow position: | chr8:48407673-48407194 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 16 |
| Conread position: | 272-720 |
| Cow position: | chr8:55580737-55581186 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 10, 134 |
| Conread position: | 292-721 |
| Cow position: | chr8:45200786-45201215 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 273 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 233, 228 |
| Conread position: | 293-702 |
| Cow position: | chr8:6958059-6957651 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 103, 112 |
| Conread position: | 294-721 |
| Cow position: | chr8:55580844-55581271 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-720 |
| Cow position: | chr8:45200898-45201298 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 116 |
| Conread position: | 329-721 |
| Cow position: | chr8:48407657-48407265 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 85 |
| Conread position: | 355-721 |
| Cow position: | chr8:55580736-55581103 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 125 |
| Conread position: | 461-707 |
| Cow position: | chr8:6958059-6957813 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 201, 211 |
| Conread position: | 533-720 |
| Cow position: | chr8:6958070-6957884 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.