Cow genome map
| Conread name: | Ova1-OVRM10205C12 |
| Conread position: | 1-467 |
| Cow position: | chrX:29045846-29045380 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 409, 391 |
| Conread position: | 1-720 |
| Cow position: | chrX:25309789-25310506 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 13 |
| Conread position: | 1-720 |
| Cow position: | chrX:25325858-25325139 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-720 |
| Cow position: | chrX:25325519-25324803 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 20 |
| Conread position: | 3-374 |
| Cow position: | chrX:29045025-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-720 |
| Cow position: | chrX:25309705-25310422 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 72 |
| Conread position: | 3-721 |
| Cow position: | chrX:25325352-25324634 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-711 |
| Cow position: | chrX:25309875-25310581 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 159 |
| Conread position: | 5-717 |
| Cow position: | chrX:25324930-25324220 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 70 |
| Conread position: | 8-628 |
| Cow position: | chrX:29045272-29044652 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 391 |
| Conread position: | 11-708 |
| Cow position: | chrX:12627346-12628041 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 408 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 11-720 |
| Cow position: | chrX:25325176-25324467 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-720 |
| Cow position: | chrX:25325260-25324551 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 11-721 |
| Cow position: | chrX:25325092-25324382 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 64 |
| Conread position: | 14-720 |
| Cow position: | chrX:25325593-25324887 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 22-390 |
| Cow position: | chrX:29045741-29045373 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 47, 53 |
| Conread position: | 31-716 |
| Cow position: | chrX:29045333-29044648 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 633, 629 |
| Conread position: | 44-710 |
| Cow position: | chrX:25324975-25324309 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 31 |
| Conread position: | 84-720 |
| Cow position: | chrX:25325691-25325055 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-473 |
| Cow position: | chrX:29045831-29045458 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 101-719 |
| Cow position: | chrX:29045344-29044729 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 103-721 |
| Cow position: | chrX:25309719-25310339 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 291 |
| Conread position: | 104-721 |
| Cow position: | chrX:25325587-25324970 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 134 |
| Conread position: | 166-721 |
| Cow position: | chrX:29045363-29044811 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 171-721 |
| Cow position: | chrX:25309705-25310255 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 29 |
| Conread position: | 173-721 |
| Cow position: | chrX:25325856-25325306 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 257-563 |
| Cow position: | chrX:29045758-29045452 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 263-721 |
| Cow position: | chrX:25309713-25310171 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 141 |
| Conread position: | 296-711 |
| Cow position: | chrX:13826924-13826509 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 326-720 |
| Cow position: | chrX:25325869-25325475 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 337-719 |
| Cow position: | chrX:29045846-29045464 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 327, 323 |
| Conread position: | 343-701 |
| Cow position: | chrX:29045756-29045400 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 0 |
| Conread position: | 368-721 |
| Cow position: | chrX:29045896-29045546 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 386-721 |
| Cow position: | chrX:25309668-25310003 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 29 |
| Conread position: | 462-720 |
| Cow position: | chrX:25309660-25309918 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 464-721 |
| Cow position: | chrX:13826924-13826667 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 102, 91 |
Show alignments to all cow chromosomes.