Cow genome map
| Conread name: | Ova1-OVRM10205H06 |
| Conread position: | 3-114 |
| Cow position: | chr1:95425997-95425884 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 36-465 |
| Cow position: | chr1:15218423-15218839 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 36-494 |
| Cow position: | chr1:78131571-78131122 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 38 |
| Conread position: | 37-369 |
| Cow position: | chr1:101661204-101661528 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 224, 158 |
| Conread position: | 39-269 |
| Cow position: | chr1:91382490-91382717 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 219, 37 |
| Conread position: | 44-337 |
| Cow position: | chr1:5215872-5216166 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 167 |
| Conread position: | 47-216 |
| Cow position: | chr1:81233960-81234125 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 27 |
| Conread position: | 68-309 |
| Cow position: | chr1:3970300-3970534 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 104-311 |
| Cow position: | chr1:89490080-89489881 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 8, 110 |
| Conread position: | 114-322 |
| Cow position: | chr1:101893324-101893122 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 116-491 |
| Cow position: | chr1:51445453-51445094 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 117-309 |
| Cow position: | chr1:92259854-92260056 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 121 |
| Conread position: | 120-312 |
| Cow position: | chr1:100820148-100819961 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 228-494 |
| Cow position: | chr1:7237859-7237581 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 230-481 |
| Cow position: | chr1:93431811-93432071 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 230-490 |
| Cow position: | chr1:77928090-77927815 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 236-490 |
| Cow position: | chr1:79954308-79954566 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 5 |
| Conread position: | 259-484 |
| Cow position: | chr1:91788417-91788183 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 48 |
| Conread position: | 259-490 |
| Cow position: | chr1:5179540-5179780 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 223 |
| Conread position: | 259-490 |
| Cow position: | chr1:47041828-47041584 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 259-507 |
| Cow position: | chr1:49702527-49702279 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 259-508 |
| Cow position: | chr1:61098954-61099212 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 82 |
| Conread position: | 260-490 |
| Cow position: | chr1:86397461-86397230 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 261-490 |
| Cow position: | chr1:86644381-86644143 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 266-490 |
| Cow position: | chr1:98767774-98767550 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 275-490 |
| Cow position: | chr1:10413080-10412858 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 28, 64 |
| Conread position: | 328-494 |
| Cow position: | chr1:5216459-5216622 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 9 |
Show alignments to all cow chromosomes.