Cow genome map

Conread name: Ova1-OVRM10210C04

Conread position: 1-274
Cow position:
Alignm length: 278
Alignm identity: 194
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 62, 33

Conread position: 1-527
Cow position:
Alignm length: 541
Alignm identity: 334
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 12, 48

Conread position: 1-649
Cow position:
Alignm length: 678
Alignm identity: 426
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 134

Conread position: 1-674
Cow position:
Alignm length: 701
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 8

Conread position: 1-695
Cow position:
Alignm length: 718
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 133

Conread position: 1-721
Cow position:
Alignm length: 745
Alignm identity: 469
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 300, 8

Conread position: 1-727
Cow position:
Alignm length: 757
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 8

Conread position: 1-732
Cow position:
Alignm length: 774
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 11

Conread position: 2-647
Cow position:
Alignm length: 655
Alignm identity: 408
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 40, 12

Conread position: 2-729
Cow position:
Alignm length: 757
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 18

Conread position: 3-414
Cow position:
Alignm length: 435
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 124

Conread position: 3-560
Cow position:
Alignm length: 577
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 35

Conread position: 3-716
Cow position:
Alignm length: 741
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 56

Conread position: 3-718
Cow position:
Alignm length: 751
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 126

Conread position: 3-729
Cow position:
Alignm length: 756
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 59

Conread position: 4-379
Cow position:
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 4-379
Cow position:
Alignm length: 379
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 57

Conread position: 4-413
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 128

Conread position: 4-476
Cow position:
Alignm length: 484
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 114

Conread position: 4-597
Cow position:
Alignm length: 619
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-626
Cow position:
Alignm length: 649
Alignm identity: 428
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 57, 95

Conread position: 4-651
Cow position:
Alignm length: 669
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 139

Conread position: 4-721
Cow position:
Alignm length: 744
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 4-726
Cow position:
Alignm length: 738
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 43

Conread position: 4-726
Cow position:
Alignm length: 744
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 26

Conread position: 4-726
Cow position:
Alignm length: 762
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 123

Conread position: 4-726
Cow position:
Alignm length: 752
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-727
Cow position:
Alignm length: 749
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 11

Conread position: 4-727
Cow position:
Alignm length: 751
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 101

Conread position: 4-727
Cow position:
Alignm length: 751
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 4-727
Cow position:
Alignm length: 753
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 121

Conread position: 4-727
Cow position:
Alignm length: 752
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-727
Cow position:
Alignm length: 750
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 54

Conread position: 4-727
Cow position:
Alignm length: 752
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-727
Cow position:
Alignm length: 752
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 124

Conread position: 4-727
Cow position:
Alignm length: 753
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 57

Conread position: 4-734
Cow position:
Alignm length: 768
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 127

Conread position: 5-426
Cow position:
Alignm length: 425
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 35

Conread position: 5-727
Cow position:
Alignm length: 752
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 33

Conread position: 5-727
Cow position:
Alignm length: 752
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 6-208
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 114

Conread position: 6-274
Cow position:
Alignm length: 272
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 127, 38

Conread position: 6-429
Cow position:
Alignm length: 428
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 57

Conread position: 7-305
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 39

Conread position: 7-674
Cow position:
Alignm length: 694
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 40

Conread position: 12-640
Cow position:
Alignm length: 638
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 104

Conread position: 14-359
Cow position:
Alignm length: 351
Alignm identity: 242
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 19, 24

Conread position: 14-379
Cow position:
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-426
Cow position:
Alignm length: 420
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-429
Cow position:
Alignm length: 422
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 80

Conread position: 14-517
Cow position:
Alignm length: 524
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 136

Conread position: 14-614
Cow position:
Alignm length: 631
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 142

Conread position: 14-646
Cow position:
Alignm length: 665
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 14-674
Cow position:
Alignm length: 687
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 47

Conread position: 14-727
Cow position:
Alignm length: 741
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 125

Conread position: 14-727
Cow position:
Alignm length: 744
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 157

Conread position: 14-727
Cow position:
Alignm length: 746
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 112

Conread position: 14-727
Cow position:
Alignm length: 738
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 37

Conread position: 14-727
Cow position:
Alignm length: 743
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 47

Conread position: 14-727
Cow position:
Alignm length: 755
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 141

Conread position: 14-727
Cow position:
Alignm length: 742
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 741
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 109

Conread position: 14-727
Cow position:
Alignm length: 746
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 14-734
Cow position:
Alignm length: 748
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 15-727
Cow position:
Alignm length: 736
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 78

Conread position: 16-492
Cow position:
Alignm length: 495
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 7

Conread position: 16-721
Cow position:
Alignm length: 736
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 16-726
Cow position:
Alignm length: 739
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 16-727
Cow position:
Alignm length: 737
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 17-728
Cow position:
Alignm length: 744
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 19-726
Cow position:
Alignm length: 740
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 169

Conread position: 20-500
Cow position:
Alignm length: 505
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 21-590
Cow position:
Alignm length: 584
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 75

Conread position: 21-718
Cow position:
Alignm length: 724
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 26

Conread position: 21-728
Cow position:
Alignm length: 727
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 117

Conread position: 21-734
Cow position:
Alignm length: 739
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 41

Conread position: 24-537
Cow position:
Alignm length: 533
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 37

Conread position: 26-720
Cow position:
Alignm length: 720
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 52

Conread position: 27-727
Cow position:
Alignm length: 730
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 28-727
Cow position:
Alignm length: 730
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 33

Conread position: 29-720
Cow position:
Alignm length: 711
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 124

Conread position: 30-716
Cow position:
Alignm length: 729
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 58

Conread position: 36-727
Cow position:
Alignm length: 720
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 119

Conread position: 41-727
Cow position:
Alignm length: 710
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 53

Conread position: 49-726
Cow position:
Alignm length: 704
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 108

Conread position: 52-305
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 52-719
Cow position:
Alignm length: 713
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 30

Conread position: 52-730
Cow position:
Alignm length: 697
Alignm identity: 423
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 127

Conread position: 54-379
Cow position:
Alignm length: 331
Alignm identity: 214
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 57

Conread position: 55-721
Cow position:
Alignm length: 684
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 44

Conread position: 55-727
Cow position:
Alignm length: 699
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 7

Conread position: 58-588
Cow position:
Alignm length: 551
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 14

Conread position: 62-734
Cow position:
Alignm length: 689
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 10

Conread position: 63-252
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 65-629
Cow position:
Alignm length: 581
Alignm identity: 372
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 261, 60

Conread position: 72-727
Cow position:
Alignm length: 684
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 86

Conread position: 78-280
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 81

Conread position: 78-429
Cow position:
Alignm length: 356
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 229, 64

Conread position: 78-700
Cow position:
Alignm length: 652
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 87-281
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 70

Conread position: 87-716
Cow position:
Alignm length: 650
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 30

Conread position: 88-715
Cow position:
Alignm length: 659
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 54

Conread position: 90-694
Cow position:
Alignm length: 632
Alignm identity: 402
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 12

Conread position: 91-721
Cow position:
Alignm length: 659
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 11

Conread position: 100-727
Cow position:
Alignm length: 648
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 103-274
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 130, 25

Conread position: 103-500
Cow position:
Alignm length: 408
Alignm identity: 265
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 49

Conread position: 105-716
Cow position:
Alignm length: 636
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 37

Conread position: 135-727
Cow position:
Alignm length: 625
Alignm identity: 400
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 18, 51

Conread position: 146-726
Cow position:
Alignm length: 598
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 39

Conread position: 147-727
Cow position:
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 38

Conread position: 148-343
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 159, 37

Conread position: 168-426
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 26

Conread position: 192-659
Cow position:
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 48

Conread position: 226-727
Cow position:
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 28

Conread position: 227-557
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 9, 250

Conread position: 245-716
Cow position:
Alignm length: 499
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 31

Conread position: 259-721
Cow position:
Alignm length: 489
Alignm identity: 325
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 19, 93

Conread position: 263-727
Cow position:
Alignm length: 488
Alignm identity: 311
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 214

Conread position: 263-727
Cow position:
Alignm length: 488
Alignm identity: 313
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 48, 292

Conread position: 283-700
Cow position:
Alignm length: 433
Alignm identity: 287
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 28, 155

Conread position: 303-726
Cow position:
Alignm length: 453
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 86

Conread position: 307-721
Cow position:
Alignm length: 432
Alignm identity: 286
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 22, 162

Conread position: 310-726
Cow position:
Alignm length: 434
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 122

Conread position: 310-727
Cow position:
Alignm length: 445
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 318-726
Cow position:
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 75

Conread position: 328-608
Cow position:
Alignm length: 300
Alignm identity: 199
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 60

Conread position: 336-721
Cow position:
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 138

Show alignments to all cow chromosomes.