Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-315 |
| Cow position: | chr10:21399390-21399079 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 1-517 |
| Cow position: | chr10:7280814-7280290 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 155 |
| Conread position: | 1-673 |
| Cow position: | chr10:19494999-19494305 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 157 |
| Conread position: | 1-695 |
| Cow position: | chr10:17197086-17196397 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 453 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 113, 11 |
| Conread position: | 1-700 |
| Cow position: | chr10:14853157-14853849 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 1-726 |
| Cow position: | chr10:21488254-21488981 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 1-727 |
| Cow position: | chr10:46192438-46193191 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 102 |
| Conread position: | 2-379 |
| Cow position: | chr10:10719906-10719554 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 38 |
| Conread position: | 3-320 |
| Cow position: | chr10:28642835-28643149 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 30, 12 |
| Conread position: | 3-379 |
| Cow position: | chr10:53321099-53320734 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 127 |
| Conread position: | 3-473 |
| Cow position: | chr10:18342862-18342407 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 69 |
| Conread position: | 3-715 |
| Cow position: | chr10:58096737-58096028 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 3-727 |
| Cow position: | chr10:39040007-39039279 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 4-418 |
| Cow position: | chr10:22575841-22575453 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 38, 47 |
| Conread position: | 4-517 |
| Cow position: | chr10:44708317-44707802 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-517 |
| Cow position: | chr10:47908228-47908742 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-558 |
| Cow position: | chr10:68160342-68159779 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 116 |
| Conread position: | 4-630 |
| Cow position: | chr10:19544092-19543473 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 58 |
| Conread position: | 4-647 |
| Cow position: | chr10:29631504-29630846 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 4-726 |
| Cow position: | chr10:7897188-7896444 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-726 |
| Cow position: | chr10:29011358-29010653 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 54 |
| Conread position: | 4-726 |
| Cow position: | chr10:51782120-51781401 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 195 |
| Conread position: | 4-727 |
| Cow position: | chr10:33870579-33871324 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 151 |
| Conread position: | 4-727 |
| Cow position: | chr10:39815104-39814362 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chr10:41568395-41569139 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-727 |
| Cow position: | chr10:55094564-55095302 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 4-734 |
| Cow position: | chr10:29101423-29100683 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 19 |
| Conread position: | 4-734 |
| Cow position: | chr10:39878135-39877386 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 113 |
| Conread position: | 5-655 |
| Cow position: | chr10:29109678-29109025 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 7-629 |
| Cow position: | chr10:14805143-14805779 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 121 |
| Conread position: | 7-727 |
| Cow position: | chr10:28256119-28255371 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 9-430 |
| Cow position: | chr10:11822046-11822468 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 9-721 |
| Cow position: | chr10:24976485-24975812 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 9-729 |
| Cow position: | chr10:54930904-54930185 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 144 |
| Conread position: | 10-418 |
| Cow position: | chr10:49646464-49646070 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 265 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 12-426 |
| Cow position: | chr10:40462384-40462789 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 12-608 |
| Cow position: | chr10:19721784-19721191 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 116 |
| Conread position: | 14-280 |
| Cow position: | chr10:11684327-11684060 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 114 |
| Conread position: | 14-418 |
| Cow position: | chr10:39181100-39181504 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-726 |
| Cow position: | chr10:37771190-37771922 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 14-727 |
| Cow position: | chr10:1378804-1379534 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 14-727 |
| Cow position: | chr10:21739443-21738717 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr10:25652125-25651381 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-727 |
| Cow position: | chr10:38344055-38343339 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 144 |
| Conread position: | 14-727 |
| Cow position: | chr10:41878227-41878961 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-727 |
| Cow position: | chr10:57556031-57555302 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 16-288 |
| Cow position: | chr10:22583709-22583441 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 18-372 |
| Cow position: | chr10:50135880-50136225 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 222 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 134, 98 |
| Conread position: | 19-726 |
| Cow position: | chr10:28946787-28947496 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 21-496 |
| Cow position: | chr10:47787994-47788459 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 21-647 |
| Cow position: | chr10:41387643-41387034 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 423 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 21-729 |
| Cow position: | chr10:19840990-19841716 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 17 |
| Conread position: | 22-298 |
| Cow position: | chr10:126601-126870 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 48, 134 |
| Conread position: | 24-718 |
| Cow position: | chr10:48397781-48397090 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 38 |
| Conread position: | 24-727 |
| Cow position: | chr10:10172048-10172779 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 30-727 |
| Cow position: | chr10:14334518-14333810 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 40-727 |
| Cow position: | chr10:19706302-19705594 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 50-311 |
| Cow position: | chr10:32430058-32430313 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 54-726 |
| Cow position: | chr10:46196421-46197075 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 20 |
| Conread position: | 65-727 |
| Cow position: | chr10:22346320-22346996 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 23 |
| Conread position: | 66-347 |
| Cow position: | chr10:53827003-53827280 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 66-478 |
| Cow position: | chr10:20537733-20538126 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 272 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 221, 20 |
| Conread position: | 72-538 |
| Cow position: | chr10:38722453-38722937 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 72-634 |
| Cow position: | chr10:58376932-58376363 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 383 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 235, 48 |
| Conread position: | 77-729 |
| Cow position: | chr10:25339460-25340142 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 82 |
| Conread position: | 135-727 |
| Cow position: | chr10:16927090-16927709 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 48 |
| Conread position: | 144-332 |
| Cow position: | chr10:36512018-36512202 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 163, 44 |
| Conread position: | 186-378 |
| Cow position: | chr10:5256591-5256397 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 192-556 |
| Cow position: | chr10:46183932-46184303 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 200-727 |
| Cow position: | chr10:41158901-41159451 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 276 |
| Conread position: | 235-721 |
| Cow position: | chr10:31539656-31540148 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 328 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 237-721 |
| Cow position: | chr10:41151209-41150698 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 169 |
| Conread position: | 246-726 |
| Cow position: | chr10:19143082-19142580 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 409 |
| Conread position: | 247-692 |
| Cow position: | chr10:21898592-21898129 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 263-729 |
| Cow position: | chr10:34909056-34909538 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 305 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 56 |
| Conread position: | 269-727 |
| Cow position: | chr10:22343034-22343501 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 153 |
| Conread position: | 304-665 |
| Cow position: | chr10:6258898-6258520 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 185 |
| Conread position: | 323-694 |
| Cow position: | chr10:6535331-6535710 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 148 |
| Conread position: | 328-727 |
| Cow position: | chr10:6556151-6556570 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
Show alignments to all cow chromosomes.