Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               1-517
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 155
               

               Conread position:
               1-673
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 157
               

               Conread position:
               1-695
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               453
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               113, 11
               

               Conread position:
               1-700
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               1-726
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 58
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               766
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 102
               

               Conread position:
               2-379
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               3-379
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 127
               

               Conread position:
               3-473
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               3-715
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               3-727
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               4-418
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               280
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               4-517
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               4-517
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               4-558
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 116
               

               Conread position:
               4-630
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               4-647
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 127
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 54
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 195
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 151
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               4-734
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 19
               

               Conread position:
               4-734
               

               Cow position:
               
               

               Alignm length:
               771
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 113
               

               Conread position:
               5-655
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               7-629
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 121
               

               Conread position:
               7-727
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               9-430
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 152
               

               Conread position:
               9-721
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 84
               

               Conread position:
               9-729
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 144
               

               Conread position:
               10-418
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               12-426
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               287
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               12-608
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               384, 116
               

               Conread position:
               14-280
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               14-418
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-726
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 144
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               16-288
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               18-372
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               222
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               134, 98
               

               Conread position:
               19-726
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 42
               

               Conread position:
               21-496
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               21-647
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               423
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               21-729
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               22-298
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 134
               

               Conread position:
               24-718
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 38
               

               Conread position:
               24-727
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 146
               

               Conread position:
               30-727
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 130
               

               Conread position:
               40-727
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               50-311
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               54-726
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 20
               

               Conread position:
               65-727
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 23
               

               Conread position:
               66-347
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               80, 30
               

               Conread position:
               66-478
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               221, 20
               

               Conread position:
               72-538
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               72-634
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               383
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               235, 48
               

               Conread position:
               77-729
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               135-727
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               144-332
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               163, 44
               

               Conread position:
               186-378
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               192-556
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               200-727
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 276
               

               Conread position:
               235-721
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               328
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               237-721
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 169
               

               Conread position:
               246-726
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 409
               

               Conread position:
               247-692
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               263-729
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               269-727
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 153
               

               Conread position:
               304-665
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 185
               

               Conread position:
               323-694
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 148
               

               Conread position:
               328-727
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 146
               
Show alignments to all cow chromosomes.