Cow genome map
Conread name: | Ova1-OVRM10210C04 |
Conread position: | 1-273 |
Cow position: | chr11:15535394-15535664 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 194 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 11, 49 |
Conread position: | 1-370 |
Cow position: | chr11:54254378-54254743 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 246 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 13, 104 |
Conread position: | 1-621 |
Cow position: | chr11:37285536-37286149 (view UCSC Genome Browser custom track) |
Alignm length: | 637 |
Alignm identity: | 405 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 66, 11 |
Conread position: | 1-652 |
Cow position: | chr11:63654405-63653737 (view UCSC Genome Browser custom track) |
Alignm length: | 680 |
Alignm identity: | 474 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 39 |
Conread position: | 1-694 |
Cow position: | chr11:18070009-18069287 (view UCSC Genome Browser custom track) |
Alignm length: | 745 |
Alignm identity: | 519 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 19 |
Conread position: | 1-712 |
Cow position: | chr11:26070120-26069383 (view UCSC Genome Browser custom track) |
Alignm length: | 751 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 191 |
Conread position: | 1-727 |
Cow position: | chr11:19063141-19062399 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 37 |
Conread position: | 1-727 |
Cow position: | chr11:44582407-44581666 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 77 |
Conread position: | 3-379 |
Cow position: | chr11:80473341-80472981 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 256 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 308, 17 |
Conread position: | 3-613 |
Cow position: | chr11:73462210-73461579 (view UCSC Genome Browser custom track) |
Alignm length: | 645 |
Alignm identity: | 417 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 9, 134 |
Conread position: | 3-716 |
Cow position: | chr11:75554066-75553357 (view UCSC Genome Browser custom track) |
Alignm length: | 733 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 174 |
Conread position: | 4-700 |
Cow position: | chr11:26784195-26784902 (view UCSC Genome Browser custom track) |
Alignm length: | 723 |
Alignm identity: | 484 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 40 |
Conread position: | 4-719 |
Cow position: | chr11:20733304-20732564 (view UCSC Genome Browser custom track) |
Alignm length: | 749 |
Alignm identity: | 531 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 151 |
Conread position: | 4-719 |
Cow position: | chr11:67845636-67844902 (view UCSC Genome Browser custom track) |
Alignm length: | 745 |
Alignm identity: | 522 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 34 |
Conread position: | 4-727 |
Cow position: | chr11:26548460-26549203 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 151 |
Conread position: | 4-727 |
Cow position: | chr11:28228831-28228092 (view UCSC Genome Browser custom track) |
Alignm length: | 754 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 125 |
Conread position: | 4-727 |
Cow position: | chr11:53286233-53285498 (view UCSC Genome Browser custom track) |
Alignm length: | 749 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 124 |
Conread position: | 4-727 |
Cow position: | chr11:73134224-73134973 (view UCSC Genome Browser custom track) |
Alignm length: | 761 |
Alignm identity: | 521 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 124 |
Conread position: | 4-728 |
Cow position: | chr11:40775065-40774352 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 57 |
Conread position: | 4-729 |
Cow position: | chr11:67451428-67452169 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 123 |
Conread position: | 5-288 |
Cow position: | chr11:35504271-35503996 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 197 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 8, 57 |
Conread position: | 5-732 |
Cow position: | chr11:33189200-33188432 (view UCSC Genome Browser custom track) |
Alignm length: | 777 |
Alignm identity: | 476 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 10, 248 |
Conread position: | 7-727 |
Cow position: | chr11:17106745-17106011 (view UCSC Genome Browser custom track) |
Alignm length: | 745 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 31 |
Conread position: | 9-241 |
Cow position: | chr11:31932384-31932614 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 165 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 56, 49 |
Conread position: | 9-279 |
Cow position: | chr11:26564153-26563899 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 186 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 16, 81 |
Conread position: | 9-698 |
Cow position: | chr11:39804671-39805374 (view UCSC Genome Browser custom track) |
Alignm length: | 726 |
Alignm identity: | 478 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 220, 12 |
Conread position: | 9-729 |
Cow position: | chr11:7117361-7118085 (view UCSC Genome Browser custom track) |
Alignm length: | 748 |
Alignm identity: | 492 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 115 |
Conread position: | 12-698 |
Cow position: | chr11:64355767-64356434 (view UCSC Genome Browser custom track) |
Alignm length: | 704 |
Alignm identity: | 455 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 25 |
Conread position: | 14-192 |
Cow position: | chr11:21444407-21444585 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 128 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 20, 105 |
Conread position: | 14-346 |
Cow position: | chr11:2882477-2882146 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 228 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 36, 30 |
Conread position: | 14-517 |
Cow position: | chr11:57627108-57626598 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 114 |
Conread position: | 14-721 |
Cow position: | chr11:44517920-44517194 (view UCSC Genome Browser custom track) |
Alignm length: | 736 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 14-727 |
Cow position: | chr11:3493933-3494657 (view UCSC Genome Browser custom track) |
Alignm length: | 739 |
Alignm identity: | 509 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 14-727 |
Cow position: | chr11:9733733-9733005 (view UCSC Genome Browser custom track) |
Alignm length: | 742 |
Alignm identity: | 511 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 14-727 |
Cow position: | chr11:32452772-32453509 (view UCSC Genome Browser custom track) |
Alignm length: | 745 |
Alignm identity: | 515 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 25 |
Conread position: | 14-727 |
Cow position: | chr11:61400133-61399426 (view UCSC Genome Browser custom track) |
Alignm length: | 741 |
Alignm identity: | 499 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 14-734 |
Cow position: | chr11:17547107-17547840 (view UCSC Genome Browser custom track) |
Alignm length: | 750 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 16-648 |
Cow position: | chr11:66730035-66730672 (view UCSC Genome Browser custom track) |
Alignm length: | 657 |
Alignm identity: | 462 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 129 |
Conread position: | 17-324 |
Cow position: | chr11:54216311-54216007 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 216 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 53, 44 |
Conread position: | 17-727 |
Cow position: | chr11:12357466-12356724 (view UCSC Genome Browser custom track) |
Alignm length: | 751 |
Alignm identity: | 526 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 44 |
Conread position: | 17-727 |
Cow position: | chr11:41169746-41169028 (view UCSC Genome Browser custom track) |
Alignm length: | 732 |
Alignm identity: | 524 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 45 |
Conread position: | 17-727 |
Cow position: | chr11:43513687-43512951 (view UCSC Genome Browser custom track) |
Alignm length: | 745 |
Alignm identity: | 525 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 43 |
Conread position: | 21-700 |
Cow position: | chr11:76373046-76372386 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 473 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 21-721 |
Cow position: | chr11:46779895-46779194 (view UCSC Genome Browser custom track) |
Alignm length: | 722 |
Alignm identity: | 486 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 137 |
Conread position: | 21-727 |
Cow position: | chr11:67154638-67155354 (view UCSC Genome Browser custom track) |
Alignm length: | 736 |
Alignm identity: | 514 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 133 |
Conread position: | 22-727 |
Cow position: | chr11:4026658-4025933 (view UCSC Genome Browser custom track) |
Alignm length: | 736 |
Alignm identity: | 502 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 106 |
Conread position: | 23-727 |
Cow position: | chr11:10848403-10849115 (view UCSC Genome Browser custom track) |
Alignm length: | 729 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 135 |
Conread position: | 37-319 |
Cow position: | chr11:36763910-36764191 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 204 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 14, 79 |
Conread position: | 41-697 |
Cow position: | chr11:29232013-29231342 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 20 |
Conread position: | 52-550 |
Cow position: | chr11:27669005-27668503 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 50 |
Conread position: | 52-627 |
Cow position: | chr11:2833313-2833867 (view UCSC Genome Browser custom track) |
Alignm length: | 592 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 76 |
Conread position: | 52-729 |
Cow position: | chr11:1489183-1488500 (view UCSC Genome Browser custom track) |
Alignm length: | 697 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 76 |
Conread position: | 65-578 |
Cow position: | chr11:44049516-44050044 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 326 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 22, 53 |
Conread position: | 66-688 |
Cow position: | chr11:44231463-44232102 (view UCSC Genome Browser custom track) |
Alignm length: | 675 |
Alignm identity: | 476 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 57 |
Conread position: | 83-727 |
Cow position: | chr11:13064964-13064301 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 44 |
Conread position: | 87-700 |
Cow position: | chr11:21475145-21475752 (view UCSC Genome Browser custom track) |
Alignm length: | 631 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 71 |
Conread position: | 144-658 |
Cow position: | chr11:17281404-17280892 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 41 |
Conread position: | 147-727 |
Cow position: | chr11:47738461-47737871 (view UCSC Genome Browser custom track) |
Alignm length: | 598 |
Alignm identity: | 412 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 36 |
Conread position: | 147-727 |
Cow position: | chr11:50836589-50835986 (view UCSC Genome Browser custom track) |
Alignm length: | 609 |
Alignm identity: | 425 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 46 |
Conread position: | 176-571 |
Cow position: | chr11:13048663-13048254 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 85 |
Conread position: | 212-690 |
Cow position: | chr11:4055186-4054693 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 330 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 101, 24 |
Conread position: | 219-727 |
Cow position: | chr11:15986398-15986923 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 98 |
Conread position: | 223-426 |
Cow position: | chr11:41234165-41234371 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 223-721 |
Cow position: | chr11:11590117-11590629 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 184 |
Conread position: | 233-727 |
Cow position: | chr11:86876723-86876207 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 243 |
Conread position: | 245-726 |
Cow position: | chr11:31863257-31863763 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 43 |
Conread position: | 281-659 |
Cow position: | chr11:81340380-81340003 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 260 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 26, 7 |
Conread position: | 290-634 |
Cow position: | chr11:34018221-34018581 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 242 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 21, 182 |
Conread position: | 305-727 |
Cow position: | chr11:1134144-1134575 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 286 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 24, 82 |
Conread position: | 331-726 |
Cow position: | chr11:11578479-11578058 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 286 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 88, 133 |
Conread position: | 337-726 |
Cow position: | chr11:40405786-40405377 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 51 |
Show alignments to all cow chromosomes.