Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 49
               

               Conread position:
               1-370
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               1-621
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               405
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               1-652
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 39
               

               Conread position:
               1-694
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               1-712
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 191
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 77
               

               Conread position:
               3-379
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               308, 17
               

               Conread position:
               3-613
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               417
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               9, 134
               

               Conread position:
               3-716
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 174
               

               Conread position:
               4-700
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               4-719
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 151
               

               Conread position:
               4-719
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 151
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 125
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               4-728
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               4-729
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 123
               

               Conread position:
               5-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 57
               

               Conread position:
               5-732
               

               Cow position:
               
               

               Alignm length:
               777
               

               Alignm identity:
               476
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 248
               

               Conread position:
               7-727
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               9-241
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               9-279
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               16, 81
               

               Conread position:
               9-698
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 12
               

               Conread position:
               9-729
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 115
               

               Conread position:
               12-698
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               14-192
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               14-346
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               14-517
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               14-721
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-734
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               16-648
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 129
               

               Conread position:
               17-324
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               17-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               17-727
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               17-727
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 43
               

               Conread position:
               21-700
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 23
               

               Conread position:
               21-721
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               21-727
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 133
               

               Conread position:
               22-727
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 106
               

               Conread position:
               23-727
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 135
               

               Conread position:
               37-319
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               41-697
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               52-550
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 50
               

               Conread position:
               52-627
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 76
               

               Conread position:
               52-729
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 76
               

               Conread position:
               65-578
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               66-688
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 57
               

               Conread position:
               83-727
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 44
               

               Conread position:
               87-700
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               144-658
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 41
               

               Conread position:
               147-727
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 36
               

               Conread position:
               147-727
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 46
               

               Conread position:
               176-571
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               212-690
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               101, 24
               

               Conread position:
               219-727
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 98
               

               Conread position:
               223-426
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               223-721
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 184
               

               Conread position:
               233-727
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 243
               

               Conread position:
               245-726
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 43
               

               Conread position:
               281-659
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               26, 7
               

               Conread position:
               290-634
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               21, 182
               

               Conread position:
               305-727
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               331-726
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               88, 133
               

               Conread position:
               337-726
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 51
               
Show alignments to all cow chromosomes.