Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-331 |
| Cow position: | chr12:20430538-20430865 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 3-334 |
| Cow position: | chr12:33119388-33119714 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 73, 10 |
| Conread position: | 3-727 |
| Cow position: | chr12:3362161-3362897 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 4-475 |
| Cow position: | chr12:21942963-21943438 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 4-690 |
| Cow position: | chr12:21482346-21483016 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 4-727 |
| Cow position: | chr12:32654769-32655510 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 189 |
| Conread position: | 5-634 |
| Cow position: | chr12:18993434-18992823 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 406 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 5-727 |
| Cow position: | chr12:48471657-48470932 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 123 |
| Conread position: | 9-379 |
| Cow position: | chr12:20843844-20844187 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 14-258 |
| Cow position: | chr12:31202257-31202015 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-716 |
| Cow position: | chr12:42607034-42606297 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr12:21209894-21210628 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 142 |
| Conread position: | 14-727 |
| Cow position: | chr12:22204483-22203750 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 143 |
| Conread position: | 16-526 |
| Cow position: | chr12:23140946-23140421 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 20-379 |
| Cow position: | chr12:34174354-34174713 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 21-454 |
| Cow position: | chr12:17979957-17980388 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 75 |
| Conread position: | 21-718 |
| Cow position: | chr12:19870145-19870836 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 66 |
| Conread position: | 21-721 |
| Cow position: | chr12:23161694-23160953 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 343 |
| Conread position: | 22-277 |
| Cow position: | chr12:349638-349893 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 107, 50 |
| Conread position: | 22-727 |
| Cow position: | chr12:27854724-27854000 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 134 |
| Conread position: | 41-727 |
| Cow position: | chr12:11099493-11100201 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 24 |
| Conread position: | 50-727 |
| Cow position: | chr12:21429280-21429973 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 8 |
| Conread position: | 83-260 |
| Cow position: | chr12:35295706-35295530 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 90-727 |
| Cow position: | chr12:24994653-24994017 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 35 |
| Conread position: | 105-721 |
| Cow position: | chr12:17967133-17967762 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 408 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 141-621 |
| Cow position: | chr12:15078208-15078679 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 166, 42 |
| Conread position: | 142-721 |
| Cow position: | chr12:21428236-21427634 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 198 |
| Conread position: | 152-661 |
| Cow position: | chr12:22568384-22567862 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 183-727 |
| Cow position: | chr12:34174740-34175308 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 300 |
| Conread position: | 297-726 |
| Cow position: | chr12:756697-757132 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 85 |
| Conread position: | 312-727 |
| Cow position: | chr12:22519452-22519017 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 163 |
Show alignments to all cow chromosomes.