Cow genome map

Conread name: Ova1-OVRM10210C04

Conread position: 1-298
Cow position: chr13:23002011-23001719 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 156

Conread position: 1-318
Cow position: chr13:21828861-21829163 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 112

Conread position: 1-410
Cow position: chr13:31555740-31555348 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 5, 44

Conread position: 1-727
Cow position: chr13:6667132-6666394 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 37

Conread position: 1-734
Cow position: chr13:22184335-22183582 (view UCSC Genome Browser custom track)
Alignm length: 779
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 61

Conread position: 3-379
Cow position: chr13:26777143-26777494 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 254
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 43

Conread position: 3-557
Cow position: chr13:30654394-30653859 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 368
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 61, 142

Conread position: 3-726
Cow position: chr13:34938449-34939179 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 27

Conread position: 3-731
Cow position: chr13:34049741-34050446 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 82

Conread position: 4-329
Cow position: chr13:5624984-5624663 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 224, 40

Conread position: 4-376
Cow position: chr13:30239320-30239700 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 132

Conread position: 4-517
Cow position: chr13:31732887-31732373 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 89

Conread position: 4-726
Cow position: chr13:34030621-34031336 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 57

Conread position: 4-726
Cow position: chr13:50110455-50111204 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 30

Conread position: 4-727
Cow position: chr13:13325931-13326665 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 123

Conread position: 4-727
Cow position: chr13:21839191-21838468 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 4-728
Cow position: chr13:5500997-5500253 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 4-730
Cow position: chr13:12733918-12733209 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 44

Conread position: 7-227
Cow position: chr13:47228994-47228775 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 122

Conread position: 9-627
Cow position: chr13:48358649-48359266 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 35

Conread position: 14-257
Cow position: chr13:17998570-17998810 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 24

Conread position: 14-271
Cow position: chr13:15519508-15519258 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 126, 47

Conread position: 14-545
Cow position: chr13:17309482-17310013 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-581
Cow position: chr13:678762-679342 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-716
Cow position: chr13:46527464-46528166 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 47

Conread position: 14-727
Cow position: chr13:34041325-34040591 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 47

Conread position: 14-734
Cow position: chr13:6358135-6358873 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 111

Conread position: 14-734
Cow position: chr13:49974677-49975426 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 15-417
Cow position: chr13:2387794-2387391 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 18, 23

Conread position: 16-379
Cow position: chr13:28860178-28860540 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 16-705
Cow position: chr13:32984328-32983621 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 109

Conread position: 16-727
Cow position: chr13:60648792-60648060 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 113

Conread position: 21-699
Cow position: chr13:42090669-42089979 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 31

Conread position: 21-726
Cow position: chr13:11797703-11796964 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 116

Conread position: 23-418
Cow position: chr13:17330751-17330367 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 260
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 210, 35

Conread position: 23-723
Cow position: chr13:33335278-33334581 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 38

Conread position: 24-426
Cow position: chr13:60468446-60468850 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 105

Conread position: 27-517
Cow position: chr13:42217656-42217160 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 10

Conread position: 64-721
Cow position: chr13:16253452-16252780 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 16

Conread position: 72-610
Cow position: chr13:50193323-50192774 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 5

Conread position: 73-727
Cow position: chr13:47575160-47575841 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 57

Conread position: 74-727
Cow position: chr13:33524877-33524214 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 46

Conread position: 77-368
Cow position: chr13:61083513-61083788 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 151, 32

Conread position: 78-429
Cow position: chr13:34324500-34324152 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 112, 18

Conread position: 78-556
Cow position: chr13:21697342-21697829 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 47

Conread position: 82-665
Cow position: chr13:50661357-50661927 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 103

Conread position: 109-662
Cow position: chr13:6640492-6641050 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 357
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 30, 77

Conread position: 111-726
Cow position: chr13:15450032-15449429 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 74

Conread position: 114-632
Cow position: chr13:60423868-60424386 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 22

Conread position: 149-617
Cow position: chr13:3534737-3534266 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 303
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 162, 63

Conread position: 188-710
Cow position: chr13:49494993-49494450 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 42

Conread position: 214-517
Cow position: chr13:11388207-11388519 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 97, 85

Conread position: 300-726
Cow position: chr13:5624448-5624005 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 297
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 126, 13

Conread position: 309-729
Cow position: chr13:19128329-19127897 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 87, 79

Conread position: 314-734
Cow position: chr13:36348826-36348399 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 294
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 15, 164

Show alignments to all cow chromosomes.