Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-298 |
| Cow position: | chr13:23002011-23001719 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 6, 156 |
| Conread position: | 1-318 |
| Cow position: | chr13:21828861-21829163 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 112 |
| Conread position: | 1-410 |
| Cow position: | chr13:31555740-31555348 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 5, 44 |
| Conread position: | 1-727 |
| Cow position: | chr13:6667132-6666394 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 1-734 |
| Cow position: | chr13:22184335-22183582 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 3-379 |
| Cow position: | chr13:26777143-26777494 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 3-557 |
| Cow position: | chr13:30654394-30653859 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 368 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 61, 142 |
| Conread position: | 3-726 |
| Cow position: | chr13:34938449-34939179 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 3-731 |
| Cow position: | chr13:34049741-34050446 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 4-329 |
| Cow position: | chr13:5624984-5624663 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 224, 40 |
| Conread position: | 4-376 |
| Cow position: | chr13:30239320-30239700 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 52, 132 |
| Conread position: | 4-517 |
| Cow position: | chr13:31732887-31732373 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 89 |
| Conread position: | 4-726 |
| Cow position: | chr13:34030621-34031336 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 4-726 |
| Cow position: | chr13:50110455-50111204 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 30 |
| Conread position: | 4-727 |
| Cow position: | chr13:13325931-13326665 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 123 |
| Conread position: | 4-727 |
| Cow position: | chr13:21839191-21838468 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 4-728 |
| Cow position: | chr13:5500997-5500253 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-730 |
| Cow position: | chr13:12733918-12733209 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 44 |
| Conread position: | 7-227 |
| Cow position: | chr13:47228994-47228775 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 9-627 |
| Cow position: | chr13:48358649-48359266 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 14-257 |
| Cow position: | chr13:17998570-17998810 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-271 |
| Cow position: | chr13:15519508-15519258 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 126, 47 |
| Conread position: | 14-545 |
| Cow position: | chr13:17309482-17310013 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-581 |
| Cow position: | chr13:678762-679342 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-716 |
| Cow position: | chr13:46527464-46528166 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 47 |
| Conread position: | 14-727 |
| Cow position: | chr13:34041325-34040591 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 14-734 |
| Cow position: | chr13:6358135-6358873 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 111 |
| Conread position: | 14-734 |
| Cow position: | chr13:49974677-49975426 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 15-417 |
| Cow position: | chr13:2387794-2387391 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 276 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 16-379 |
| Cow position: | chr13:28860178-28860540 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 16-705 |
| Cow position: | chr13:32984328-32983621 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 109 |
| Conread position: | 16-727 |
| Cow position: | chr13:60648792-60648060 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 113 |
| Conread position: | 21-699 |
| Cow position: | chr13:42090669-42089979 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 31 |
| Conread position: | 21-726 |
| Cow position: | chr13:11797703-11796964 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 116 |
| Conread position: | 23-418 |
| Cow position: | chr13:17330751-17330367 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 210, 35 |
| Conread position: | 23-723 |
| Cow position: | chr13:33335278-33334581 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 24-426 |
| Cow position: | chr13:60468446-60468850 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 105 |
| Conread position: | 27-517 |
| Cow position: | chr13:42217656-42217160 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 10 |
| Conread position: | 64-721 |
| Cow position: | chr13:16253452-16252780 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 16 |
| Conread position: | 72-610 |
| Cow position: | chr13:50193323-50192774 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 5 |
| Conread position: | 73-727 |
| Cow position: | chr13:47575160-47575841 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 74-727 |
| Cow position: | chr13:33524877-33524214 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 46 |
| Conread position: | 77-368 |
| Cow position: | chr13:61083513-61083788 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 151, 32 |
| Conread position: | 78-429 |
| Cow position: | chr13:34324500-34324152 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 78-556 |
| Cow position: | chr13:21697342-21697829 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 47 |
| Conread position: | 82-665 |
| Cow position: | chr13:50661357-50661927 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 103 |
| Conread position: | 109-662 |
| Cow position: | chr13:6640492-6641050 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 357 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 111-726 |
| Cow position: | chr13:15450032-15449429 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 114-632 |
| Cow position: | chr13:60423868-60424386 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 22 |
| Conread position: | 149-617 |
| Cow position: | chr13:3534737-3534266 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 162, 63 |
| Conread position: | 188-710 |
| Cow position: | chr13:49494993-49494450 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 42 |
| Conread position: | 214-517 |
| Cow position: | chr13:11388207-11388519 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 97, 85 |
| Conread position: | 300-726 |
| Cow position: | chr13:5624448-5624005 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 297 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 126, 13 |
| Conread position: | 309-729 |
| Cow position: | chr13:19128329-19127897 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 293 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 87, 79 |
| Conread position: | 314-734 |
| Cow position: | chr13:36348826-36348399 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 15, 164 |
Show alignments to all cow chromosomes.