Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-248 |
| Cow position: | chr14:30736043-30736289 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 1-379 |
| Cow position: | chr14:27990730-27990371 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 6, 104 |
| Conread position: | 1-418 |
| Cow position: | chr14:33402565-33402970 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 283 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 1-726 |
| Cow position: | chr14:44552720-44553447 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 49 |
| Conread position: | 1-726 |
| Cow position: | chr14:48826161-48826890 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 116 |
| Conread position: | 1-727 |
| Cow position: | chr14:16918842-16918112 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 1-729 |
| Cow position: | chr14:25365612-25364900 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 3-379 |
| Cow position: | chr14:44227255-44227628 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 4-272 |
| Cow position: | chr14:40168854-40168597 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 4-303 |
| Cow position: | chr14:30705437-30705135 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 93 |
| Conread position: | 4-418 |
| Cow position: | chr14:10147751-10148165 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-619 |
| Cow position: | chr14:27978238-27978864 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 138 |
| Conread position: | 4-675 |
| Cow position: | chr14:45678201-45677526 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 123 |
| Conread position: | 4-700 |
| Cow position: | chr14:30762002-30761320 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 4-721 |
| Cow position: | chr14:23256477-23255746 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 69 |
| Conread position: | 4-726 |
| Cow position: | chr14:29775198-29774498 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 119 |
| Conread position: | 4-727 |
| Cow position: | chr14:1659333-1660078 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 5-278 |
| Cow position: | chr14:2951686-2951426 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 5-317 |
| Cow position: | chr14:35384940-35384641 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 5-653 |
| Cow position: | chr14:25692830-25693478 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 39 |
| Conread position: | 5-727 |
| Cow position: | chr14:751446-752185 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 7-418 |
| Cow position: | chr14:9046458-9046870 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 279 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 8-641 |
| Cow position: | chr14:24996712-24996090 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 52 |
| Conread position: | 9-710 |
| Cow position: | chr14:29224210-29223470 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 9-728 |
| Cow position: | chr14:44289950-44290684 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 12-727 |
| Cow position: | chr14:38814603-38813863 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 116 |
| Conread position: | 14-344 |
| Cow position: | chr14:50111682-50112020 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 14-478 |
| Cow position: | chr14:12124296-12123822 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-519 |
| Cow position: | chr14:17687384-17687895 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 14-640 |
| Cow position: | chr14:45671159-45670503 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-661 |
| Cow position: | chr14:33677955-33678614 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 72 |
| Conread position: | 14-721 |
| Cow position: | chr14:44380220-44380962 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 126 |
| Conread position: | 14-726 |
| Cow position: | chr14:13863208-13862484 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 14-727 |
| Cow position: | chr14:190932-191669 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 116 |
| Conread position: | 14-727 |
| Cow position: | chr14:5529950-5530678 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 48 |
| Conread position: | 14-727 |
| Cow position: | chr14:13779833-13780569 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 136 |
| Conread position: | 14-727 |
| Cow position: | chr14:19327374-19326643 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr14:22030557-22029851 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 47 |
| Conread position: | 14-727 |
| Cow position: | chr14:32447850-32448576 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 141 |
| Conread position: | 15-317 |
| Cow position: | chr14:30583708-30583410 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 68 |
| Conread position: | 15-367 |
| Cow position: | chr14:33240352-33240676 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 17-727 |
| Cow position: | chr14:16272403-16271706 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 136 |
| Conread position: | 19-326 |
| Cow position: | chr14:40341944-40342254 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 5, 26 |
| Conread position: | 21-418 |
| Cow position: | chr14:23932494-23932879 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 21-526 |
| Cow position: | chr14:37455022-37454536 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 282, 37 |
| Conread position: | 21-726 |
| Cow position: | chr14:12611320-12612010 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 27-284 |
| Cow position: | chr14:31882358-31882613 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 39, 101 |
| Conread position: | 41-519 |
| Cow position: | chr14:15274923-15274442 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 52-698 |
| Cow position: | chr14:18417434-18418082 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 77 |
| Conread position: | 54-726 |
| Cow position: | chr14:30595423-30594735 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 82-734 |
| Cow position: | chr14:2287224-2287890 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 87-721 |
| Cow position: | chr14:20564652-20564066 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 432 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 118-429 |
| Cow position: | chr14:9521727-9521419 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 135-476 |
| Cow position: | chr14:47939963-47939632 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 196, 50 |
| Conread position: | 137-721 |
| Cow position: | chr14:16342891-16342287 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 149-727 |
| Cow position: | chr14:16808299-16807703 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 36 |
| Conread position: | 227-726 |
| Cow position: | chr14:41410855-41411366 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 345 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 245-655 |
| Cow position: | chr14:46403076-46403495 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 180, 58 |
| Conread position: | 246-727 |
| Cow position: | chr14:33392805-33392304 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 76 |
| Conread position: | 259-726 |
| Cow position: | chr14:34861753-34862239 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 332 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 47, 136 |
| Conread position: | 280-700 |
| Cow position: | chr14:33712227-33712669 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 10, 191 |
| Conread position: | 359-726 |
| Cow position: | chr14:50142207-50142593 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 67, 115 |
Show alignments to all cow chromosomes.