Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-272 |
| Cow position: | chr15:51715790-51716053 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 1-306 |
| Cow position: | chr15:6367929-6367617 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 120, 64 |
| Conread position: | 1-332 |
| Cow position: | chr15:6552948-6552615 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 186 |
| Conread position: | 1-418 |
| Cow position: | chr15:7892455-7892059 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 14 |
| Conread position: | 1-434 |
| Cow position: | chr15:7551019-7551448 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 64, 150 |
| Conread position: | 1-718 |
| Cow position: | chr15:35646801-35646083 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 3-319 |
| Cow position: | chr15:1783116-1783431 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 125 |
| Conread position: | 3-429 |
| Cow position: | chr15:1238563-1238984 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 51, 23 |
| Conread position: | 3-700 |
| Cow position: | chr15:3182188-3181480 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 3-721 |
| Cow position: | chr15:9003335-9002613 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 130 |
| Conread position: | 3-726 |
| Cow position: | chr15:4686606-4687347 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 95 |
| Conread position: | 4-379 |
| Cow position: | chr15:1299679-1299298 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 187 |
| Conread position: | 4-412 |
| Cow position: | chr15:50147955-50148370 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-418 |
| Cow position: | chr15:6079625-6080031 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 126 |
| Conread position: | 4-628 |
| Cow position: | chr15:14581484-14580845 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-630 |
| Cow position: | chr15:28489269-28488637 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 4-705 |
| Cow position: | chr15:2588574-2587843 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 124 |
| Conread position: | 4-721 |
| Cow position: | chr15:6383293-6382547 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 199 |
| Conread position: | 4-721 |
| Cow position: | chr15:50123054-50122326 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-726 |
| Cow position: | chr15:11293555-11292822 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 102 |
| Conread position: | 4-727 |
| Cow position: | chr15:5010756-5010010 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 82 |
| Conread position: | 4-727 |
| Cow position: | chr15:7545724-7546491 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 153 |
| Conread position: | 4-727 |
| Cow position: | chr15:7838141-7838887 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 154 |
| Conread position: | 4-727 |
| Cow position: | chr15:18577592-18578328 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 4-730 |
| Cow position: | chr15:7965080-7964329 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 5-379 |
| Cow position: | chr15:611420-611052 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 5-727 |
| Cow position: | chr15:18266901-18266147 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 151 |
| Conread position: | 14-426 |
| Cow position: | chr15:1773388-1773797 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-517 |
| Cow position: | chr15:4197352-4197862 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 14-517 |
| Cow position: | chr15:25654184-25653665 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 133 |
| Conread position: | 14-700 |
| Cow position: | chr15:6459791-6460476 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 434 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 14-727 |
| Cow position: | chr15:2646765-2646030 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr15:4386643-4387370 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 83 |
| Conread position: | 14-727 |
| Cow position: | chr15:4726092-4726821 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 14-727 |
| Cow position: | chr15:7563881-7564616 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr15:19737171-19736426 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 112 |
| Conread position: | 16-312 |
| Cow position: | chr15:4823353-4823638 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 40 |
| Conread position: | 16-623 |
| Cow position: | chr15:21914886-21915510 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 395 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 16-732 |
| Cow position: | chr15:4108419-4107693 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 17-553 |
| Cow position: | chr15:24295978-24296521 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 17-706 |
| Cow position: | chr15:18331946-18331240 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 18-557 |
| Cow position: | chr15:13074907-13075430 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 348 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 24, 87 |
| Conread position: | 18-597 |
| Cow position: | chr15:11626556-11627154 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 21-274 |
| Cow position: | chr15:7235144-7235398 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 18, 76 |
| Conread position: | 21-277 |
| Cow position: | chr15:6067285-6067042 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 21-417 |
| Cow position: | chr15:20361196-20360806 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 21-707 |
| Cow position: | chr15:53299363-53300052 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 7 |
| Conread position: | 21-726 |
| Cow position: | chr15:580322-581044 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 105 |
| Conread position: | 41-727 |
| Cow position: | chr15:6155014-6154314 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 44-727 |
| Cow position: | chr15:32067688-32066990 (view UCSC Genome Browser custom track) |
| Alignm length: | 711 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 47-734 |
| Cow position: | chr15:8058891-8059590 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 81 |
| Conread position: | 48-721 |
| Cow position: | chr15:3889847-3890515 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 50-374 |
| Cow position: | chr15:32515163-32514858 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 50-548 |
| Cow position: | chr15:17149054-17149538 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 336 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 276, 60 |
| Conread position: | 52-544 |
| Cow position: | chr15:51218650-51219150 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 20 |
| Conread position: | 52-733 |
| Cow position: | chr15:26156766-26157453 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 65 |
| Conread position: | 54-429 |
| Cow position: | chr15:51675646-51676021 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 83-727 |
| Cow position: | chr15:33122334-33122998 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 42 |
| Conread position: | 83-731 |
| Cow position: | chr15:38651144-38651809 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 440 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 83-733 |
| Cow position: | chr15:24288511-24287852 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 84-732 |
| Cow position: | chr15:44302137-44301480 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 98-426 |
| Cow position: | chr15:4141763-4141440 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 213, 27 |
| Conread position: | 113-725 |
| Cow position: | chr15:1767831-1768446 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 54 |
| Conread position: | 115-640 |
| Cow position: | chr15:35898792-35898247 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 71 |
| Conread position: | 117-692 |
| Cow position: | chr15:31846440-31847027 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 119-688 |
| Cow position: | chr15:32719669-32719098 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 120-727 |
| Cow position: | chr15:6279473-6280083 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 120-729 |
| Cow position: | chr15:7929569-7930186 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 139-379 |
| Cow position: | chr15:29343215-29342977 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 147-674 |
| Cow position: | chr15:41659187-41659730 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 147-727 |
| Cow position: | chr15:107020-107619 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 147-727 |
| Cow position: | chr15:6561606-6562205 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 37 |
| Conread position: | 147-727 |
| Cow position: | chr15:25205984-25205389 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 19 |
| Conread position: | 148-517 |
| Cow position: | chr15:17077542-17077169 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 159, 37 |
| Conread position: | 193-517 |
| Cow position: | chr15:6613783-6614116 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 118, 267 |
| Conread position: | 215-674 |
| Cow position: | chr15:13390232-13389767 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 30 |
| Conread position: | 246-706 |
| Cow position: | chr15:7235442-7235916 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 322-729 |
| Cow position: | chr15:3834796-3834381 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 108, 145 |
| Conread position: | 331-727 |
| Cow position: | chr15:4081034-4080618 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 143 |
| Conread position: | 332-727 |
| Cow position: | chr15:1783533-1783957 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 289 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 92, 142 |
Show alignments to all cow chromosomes.