Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 186
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 14
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               64, 150
               

               Conread position:
               1-718
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               3-319
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 125
               

               Conread position:
               3-429
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               3-700
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 11
               

               Conread position:
               3-721
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 130
               

               Conread position:
               3-726
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 95
               

               Conread position:
               4-379
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 187
               

               Conread position:
               4-412
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-418
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 126
               

               Conread position:
               4-628
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-630
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 57
               

               Conread position:
               4-705
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 124
               

               Conread position:
               4-721
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 199
               

               Conread position:
               4-721
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 102
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 153
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 154
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 152
               

               Conread position:
               4-730
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               5-379
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 126
               

               Conread position:
               5-727
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 151
               

               Conread position:
               14-426
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-517
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               14-517
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 133
               

               Conread position:
               14-700
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               434
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 83
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 112
               

               Conread position:
               16-312
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               16-623
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               395
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 32
               

               Conread position:
               16-732
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               17-553
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               17-706
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 110
               

               Conread position:
               18-557
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               348
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               18-597
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               21-274
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 76
               

               Conread position:
               21-277
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               21-417
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               21-707
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 7
               

               Conread position:
               21-726
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               41-727
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 85
               

               Conread position:
               44-727
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               47-734
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 81
               

               Conread position:
               48-721
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 29
               

               Conread position:
               50-374
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               50-548
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               336
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               276, 60
               

               Conread position:
               52-544
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               52-733
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 65
               

               Conread position:
               54-429
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               83-727
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 42
               

               Conread position:
               83-731
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               440
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               12, 92
               

               Conread position:
               83-733
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               84-732
               

               Cow position:
               
               

               Alignm length:
               680
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               98-426
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               213, 27
               

               Conread position:
               113-725
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               115-640
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               117-692
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               119-688
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               120-727
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               120-729
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 47
               

               Conread position:
               139-379
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               115, 47
               

               Conread position:
               147-674
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 36
               

               Conread position:
               147-727
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 36
               

               Conread position:
               147-727
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 37
               

               Conread position:
               147-727
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 19
               

               Conread position:
               148-517
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               159, 37
               

               Conread position:
               193-517
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               118, 267
               

               Conread position:
               215-674
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 30
               

               Conread position:
               246-706
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               322-729
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               108, 145
               

               Conread position:
               331-727
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 143
               

               Conread position:
               332-727
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               289
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               92, 142
               
Show alignments to all cow chromosomes.