Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-356
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 50
               

               Conread position:
               1-502
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 21
               

               Conread position:
               1-602
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 161
               

               Conread position:
               1-622
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 62
               

               Conread position:
               1-721
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 188
               

               Conread position:
               1-729
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               326, 8
               

               Conread position:
               2-264
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               2-689
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               3-333
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               3-726
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               3-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               4-271
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               77, 57
               

               Conread position:
               4-421
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 27
               

               Conread position:
               4-444
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               294
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               77, 57
               

               Conread position:
               4-517
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-519
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               224, 33
               

               Conread position:
               4-706
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               4-716
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 32
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 149
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 40
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               9-327
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 42
               

               Conread position:
               9-569
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 53
               

               Conread position:
               9-729
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               240, 24
               

               Conread position:
               14-228
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-231
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-242
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-305
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               14-317
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-320
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               57, 47
               

               Conread position:
               14-726
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 47
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               16-249
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               16-477
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               305
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               16-726
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               379, 46
               

               Conread position:
               17-629
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 136
               

               Conread position:
               17-727
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               17-727
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               21-266
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               21-446
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 73
               

               Conread position:
               21-661
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               23-342
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               45, 38
               

               Conread position:
               23-734
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 88
               

               Conread position:
               24-721
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 34
               

               Conread position:
               24-726
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               27-424
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 83
               

               Conread position:
               29-726
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 88
               

               Conread position:
               34-734
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               37-734
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 161
               

               Conread position:
               62-726
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               62-727
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 61
               

               Conread position:
               65-727
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 60
               

               Conread position:
               74-710
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 54
               

               Conread position:
               81-369
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               8, 110
               

               Conread position:
               81-379
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               81-664
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               385
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               138, 43
               

               Conread position:
               81-729
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               103-726
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               135-524
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               8, 108
               

               Conread position:
               137-726
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               401
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               14, 49
               

               Conread position:
               168-726
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 26
               

               Conread position:
               223-486
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 13
               

               Conread position:
               236-727
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 240
               

               Conread position:
               246-721
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               335
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               180, 30
               

               Conread position:
               270-726
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               278-721
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               308
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               310-721
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               312-721
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               325-568
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               325-727
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 108
               

               Conread position:
               327-727
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               289
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               91, 409
               

               Conread position:
               340-661
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               185, 86
               
Show alignments to all cow chromosomes.