Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-568 |
| Cow position: | chr17:1786850-1786286 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 3-255 |
| Cow position: | chr17:150777-150534 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 3-356 |
| Cow position: | chr17:18194911-18195239 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 3-726 |
| Cow position: | chr17:20080764-20080050 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 74 |
| Conread position: | 3-727 |
| Cow position: | chr17:15851795-15852543 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 58 |
| Conread position: | 4-347 |
| Cow position: | chr17:6120823-6121157 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 4-562 |
| Cow position: | chr17:9080314-9079745 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-711 |
| Cow position: | chr17:20403537-20404238 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 4-718 |
| Cow position: | chr17:20086659-20085935 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 128 |
| Conread position: | 4-721 |
| Cow position: | chr17:2077889-2077152 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 166 |
| Conread position: | 4-726 |
| Cow position: | chr17:20099360-20098640 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 80 |
| Conread position: | 4-727 |
| Cow position: | chr17:182683-183421 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chr17:14936862-14936123 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 4-727 |
| Cow position: | chr17:15142248-15141500 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-727 |
| Cow position: | chr17:15436889-15437634 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chr17:43989609-43990344 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 152 |
| Conread position: | 6-734 |
| Cow position: | chr17:24783271-24784016 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 13-720 |
| Cow position: | chr17:2169538-2170264 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 14-256 |
| Cow position: | chr17:20389969-20389729 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-305 |
| Cow position: | chr17:21769890-21769601 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-517 |
| Cow position: | chr17:3655176-3654662 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-517 |
| Cow position: | chr17:14240617-14241131 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 14-641 |
| Cow position: | chr17:34157237-34157879 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-721 |
| Cow position: | chr17:11783971-11784711 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr17:23323335-23322598 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr17:39049331-39050067 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 17-727 |
| Cow position: | chr17:19267706-19266994 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 105 |
| Conread position: | 18-721 |
| Cow position: | chr17:8203071-8203773 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 21-597 |
| Cow position: | chr17:3707658-3707086 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 138 |
| Conread position: | 21-659 |
| Cow position: | chr17:14039921-14039277 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 21-726 |
| Cow position: | chr17:23038700-23039402 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 34-652 |
| Cow position: | chr17:2263281-2263909 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 91 |
| Conread position: | 36-727 |
| Cow position: | chr17:28027361-28026657 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 106 |
| Conread position: | 49-316 |
| Cow position: | chr17:2555405-2555142 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 55-376 |
| Cow position: | chr17:18592765-18593076 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 230, 47 |
| Conread position: | 134-734 |
| Cow position: | chr17:4783573-4782958 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 147-698 |
| Cow position: | chr17:13967178-13967745 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 230-519 |
| Cow position: | chr17:42266992-42267285 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 189, 48 |
| Conread position: | 250-731 |
| Cow position: | chr17:24335911-24336406 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 113 |
| Conread position: | 254-727 |
| Cow position: | chr17:6121142-6121636 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 277-727 |
| Cow position: | chr17:39817-40290 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 199 |
| Conread position: | 288-707 |
| Cow position: | chr17:21432648-21432209 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 294-697 |
| Cow position: | chr17:17257296-17256869 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 182 |
| Conread position: | 310-727 |
| Cow position: | chr17:2554864-2554425 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 165 |
| Conread position: | 319-649 |
| Cow position: | chr17:20415040-20414695 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 10, 156 |
| Conread position: | 328-727 |
| Cow position: | chr17:4346149-4345743 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 146 |
| Conread position: | 328-727 |
| Cow position: | chr17:19980706-19980289 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
Show alignments to all cow chromosomes.