Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-727 |
| Cow position: | chr18:14417291-14418027 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 113 |
| Conread position: | 3-290 |
| Cow position: | chr18:54271793-54272079 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 3-333 |
| Cow position: | chr18:16079988-16080316 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 125 |
| Conread position: | 3-429 |
| Cow position: | chr18:56013902-56014314 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 61, 79 |
| Conread position: | 3-721 |
| Cow position: | chr18:40345089-40344342 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 4-305 |
| Cow position: | chr18:11273799-11273502 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 56, 126 |
| Conread position: | 4-366 |
| Cow position: | chr18:54022813-54022455 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 163 |
| Conread position: | 4-517 |
| Cow position: | chr18:51461735-51461215 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-599 |
| Cow position: | chr18:54170193-54169597 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 127 |
| Conread position: | 4-661 |
| Cow position: | chr18:29238214-29238874 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 6-414 |
| Cow position: | chr18:38342973-38342580 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 273 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 321, 119 |
| Conread position: | 14-237 |
| Cow position: | chr18:25921305-25921525 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 105 |
| Conread position: | 14-426 |
| Cow position: | chr18:26245294-26244885 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-623 |
| Cow position: | chr18:51343013-51343633 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 140 |
| Conread position: | 22-727 |
| Cow position: | chr18:14131729-14132448 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 23-519 |
| Cow position: | chr18:35054476-35054961 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 94 |
| Conread position: | 24-192 |
| Cow position: | chr18:18528539-18528696 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 38 |
| Conread position: | 24-326 |
| Cow position: | chr18:17672467-17672170 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 24-726 |
| Cow position: | chr18:4947311-4948000 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 20 |
| Conread position: | 26-369 |
| Cow position: | chr18:27836970-27836626 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 27-734 |
| Cow position: | chr18:15856555-15857246 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 34-734 |
| Cow position: | chr18:51274728-51274022 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 47-660 |
| Cow position: | chr18:19485510-19486133 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 47-700 |
| Cow position: | chr18:37558905-37559551 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 18 |
| Conread position: | 66-727 |
| Cow position: | chr18:33270303-33270953 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 23 |
| Conread position: | 78-534 |
| Cow position: | chr18:36177671-36177231 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 81-652 |
| Cow position: | chr18:32769120-32769703 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 86-518 |
| Cow position: | chr18:56485254-56484815 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 139, 56 |
| Conread position: | 112-721 |
| Cow position: | chr18:37663751-37664339 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 13 |
| Conread position: | 147-728 |
| Cow position: | chr18:17962283-17961691 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 36 |
| Conread position: | 148-721 |
| Cow position: | chr18:24617596-24618185 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 24 |
| Conread position: | 188-378 |
| Cow position: | chr18:29021022-29020833 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 214-517 |
| Cow position: | chr18:27538385-27538698 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 97, 262 |
| Conread position: | 310-611 |
| Cow position: | chr18:48469561-48469243 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.