Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 11
               

               Conread position:
               1-379
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 11
               

               Conread position:
               1-392
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               268, 13
               

               Conread position:
               1-641
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 12
               

               Conread position:
               1-721
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 50
               

               Conread position:
               1-729
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               2-289
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 9
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               3-496
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 35
               

               Conread position:
               3-517
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 10
               

               Conread position:
               3-557
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               373
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               311, 58
               

               Conread position:
               3-721
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 93
               

               Conread position:
               3-727
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               4-429
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 123
               

               Conread position:
               4-495
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 123
               

               Conread position:
               4-550
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 24
               

               Conread position:
               4-634
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 141
               

               Conread position:
               4-665
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 74
               

               Conread position:
               4-693
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 153
               

               Conread position:
               4-693
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 182
               

               Conread position:
               4-700
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               4-708
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-716
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               4-717
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 100
               

               Conread position:
               4-718
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               4-721
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 132
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 28
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 90
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 43
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 113
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               5-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               7-726
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               7-727
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               9-424
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 35
               

               Conread position:
               9-582
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               379
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               12-727
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               464
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               13-498
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               328
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               237, 48
               

               Conread position:
               14-426
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-721
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-721
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 30
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 109
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-729
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               16-459
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 117
               

               Conread position:
               17-727
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               21-268
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               41, 135
               

               Conread position:
               21-271
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 124
               

               Conread position:
               21-716
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               21-729
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               21-734
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 65
               

               Conread position:
               25-379
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               32-346
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               27, 91
               

               Conread position:
               34-377
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               36-424
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               50-418
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 104
               

               Conread position:
               52-621
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               370
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               219, 10
               

               Conread position:
               55-521
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               75-340
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               75-721
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 29
               

               Conread position:
               81-710
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               87-734
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 40
               

               Conread position:
               91-345
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               91-608
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               335
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               100-726
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 54
               

               Conread position:
               128-726
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 57
               

               Conread position:
               133-674
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               153-727
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 32
               

               Conread position:
               188-485
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               88, 96
               

               Conread position:
               195-719
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               358
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               77, 64
               

               Conread position:
               214-557
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               23, 102
               

               Conread position:
               228-627
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               284
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               230-717
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               345
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               84, 150
               

               Conread position:
               239-727
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 112
               

               Conread position:
               246-518
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 144
               

               Conread position:
               309-726
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               310-511
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 78
               

               Conread position:
               310-616
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               315-721
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 156
               

               Conread position:
               320-634
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               75, 68
               

               Conread position:
               327-727
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 300
               

               Conread position:
               328-721
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               193, 103
               

               Conread position:
               335-726
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               84, 139
               
Show alignments to all cow chromosomes.