Cow genome map
Conread name: | Ova1-OVRM10210C04 |
Conread position: | 1-481 |
Cow position: | chr21:21943195-21942711 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 50 |
Conread position: | 1-726 |
Cow position: | chr21:6625926-6626637 (view UCSC Genome Browser custom track) |
Alignm length: | 749 |
Alignm identity: | 495 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 132 |
Conread position: | 1-727 |
Cow position: | chr21:5018529-5019278 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 536 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 155 |
Conread position: | 1-727 |
Cow position: | chr21:27284860-27285583 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 13 |
Conread position: | 1-730 |
Cow position: | chr21:29004141-29003386 (view UCSC Genome Browser custom track) |
Alignm length: | 772 |
Alignm identity: | 583 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 125 |
Conread position: | 2-422 |
Cow position: | chr21:41404706-41405126 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 286 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 67, 9 |
Conread position: | 3-274 |
Cow position: | chr21:4185311-4185575 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 196 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 9, 82 |
Conread position: | 3-376 |
Cow position: | chr21:2722457-2722823 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 243 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 59, 123 |
Conread position: | 3-700 |
Cow position: | chr21:4712129-4712784 (view UCSC Genome Browser custom track) |
Alignm length: | 705 |
Alignm identity: | 445 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 9, 32 |
Conread position: | 3-712 |
Cow position: | chr21:36979522-36978784 (view UCSC Genome Browser custom track) |
Alignm length: | 749 |
Alignm identity: | 553 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 8 |
Conread position: | 4-727 |
Cow position: | chr21:2512241-2512985 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 124 |
Conread position: | 4-727 |
Cow position: | chr21:11507006-11507743 (view UCSC Genome Browser custom track) |
Alignm length: | 752 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 34 |
Conread position: | 4-727 |
Cow position: | chr21:26635762-26635021 (view UCSC Genome Browser custom track) |
Alignm length: | 753 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 44 |
Conread position: | 4-727 |
Cow position: | chr21:37372632-37373362 (view UCSC Genome Browser custom track) |
Alignm length: | 751 |
Alignm identity: | 523 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 43 |
Conread position: | 5-324 |
Cow position: | chr21:42914755-42915076 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 222 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 20, 126 |
Conread position: | 5-726 |
Cow position: | chr21:40080792-40081502 (view UCSC Genome Browser custom track) |
Alignm length: | 749 |
Alignm identity: | 476 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 8, 44 |
Conread position: | 5-732 |
Cow position: | chr21:43805139-43804404 (view UCSC Genome Browser custom track) |
Alignm length: | 757 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 43 |
Conread position: | 9-465 |
Cow position: | chr21:1286803-1286363 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 35 |
Conread position: | 9-727 |
Cow position: | chr21:47942346-47943082 (view UCSC Genome Browser custom track) |
Alignm length: | 746 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 146 |
Conread position: | 12-729 |
Cow position: | chr21:1075465-1076174 (view UCSC Genome Browser custom track) |
Alignm length: | 740 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 145 |
Conread position: | 14-367 |
Cow position: | chr21:12054613-12054262 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 246 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 19, 24 |
Conread position: | 14-379 |
Cow position: | chr21:34822808-34822443 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 114 |
Conread position: | 14-727 |
Cow position: | chr21:30598076-30597332 (view UCSC Genome Browser custom track) |
Alignm length: | 751 |
Alignm identity: | 532 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 47 |
Conread position: | 14-727 |
Cow position: | chr21:47646733-47647469 (view UCSC Genome Browser custom track) |
Alignm length: | 747 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 149 |
Conread position: | 16-727 |
Cow position: | chr21:19612163-19612892 (view UCSC Genome Browser custom track) |
Alignm length: | 738 |
Alignm identity: | 503 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 22 |
Conread position: | 17-719 |
Cow position: | chr21:3780177-3780902 (view UCSC Genome Browser custom track) |
Alignm length: | 733 |
Alignm identity: | 520 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 44 |
Conread position: | 21-367 |
Cow position: | chr21:45782890-45783225 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 243 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 23-379 |
Cow position: | chr21:21520011-21520370 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 135 |
Conread position: | 23-728 |
Cow position: | chr21:147339-148057 (view UCSC Genome Browser custom track) |
Alignm length: | 733 |
Alignm identity: | 528 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 38 |
Conread position: | 24-519 |
Cow position: | chr21:33253595-33254096 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 87 |
Conread position: | 28-634 |
Cow position: | chr21:405731-405124 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 398 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 112, 71 |
Conread position: | 36-726 |
Cow position: | chr21:13298026-13298713 (view UCSC Genome Browser custom track) |
Alignm length: | 713 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 26 |
Conread position: | 50-726 |
Cow position: | chr21:21024910-21025605 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 497 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 14 |
Conread position: | 50-726 |
Cow position: | chr21:31250454-31251126 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 477 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 48 |
Conread position: | 51-369 |
Cow position: | chr21:5839750-5839431 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 229 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 29, 45 |
Conread position: | 51-715 |
Cow position: | chr21:31639361-31640030 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 449 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 16, 47 |
Conread position: | 52-721 |
Cow position: | chr21:39426514-39427194 (view UCSC Genome Browser custom track) |
Alignm length: | 693 |
Alignm identity: | 472 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 21 |
Conread position: | 52-728 |
Cow position: | chr21:2539642-2538936 (view UCSC Genome Browser custom track) |
Alignm length: | 716 |
Alignm identity: | 475 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 100 |
Conread position: | 53-307 |
Cow position: | chr21:9865846-9865619 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 185 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 221, 18 |
Conread position: | 56-721 |
Cow position: | chr21:34655287-34655954 (view UCSC Genome Browser custom track) |
Alignm length: | 691 |
Alignm identity: | 480 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 74 |
Conread position: | 58-517 |
Cow position: | chr21:38801886-38802350 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 14 |
Conread position: | 70-624 |
Cow position: | chr21:4588540-4587985 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 373 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 158, 49 |
Conread position: | 78-647 |
Cow position: | chr21:45491513-45492094 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 381 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 214, 45 |
Conread position: | 86-721 |
Cow position: | chr21:26566785-26566141 (view UCSC Genome Browser custom track) |
Alignm length: | 663 |
Alignm identity: | 414 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 12, 85 |
Conread position: | 90-729 |
Cow position: | chr21:38805916-38805267 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 414 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 218, 19 |
Conread position: | 102-629 |
Cow position: | chr21:9893457-9894001 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 26 |
Conread position: | 117-726 |
Cow position: | chr21:997329-996706 (view UCSC Genome Browser custom track) |
Alignm length: | 643 |
Alignm identity: | 433 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 69 |
Conread position: | 147-630 |
Cow position: | chr21:6414487-6413989 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 36 |
Conread position: | 188-727 |
Cow position: | chr21:33710723-33711269 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 294 |
Conread position: | 205-344 |
Cow position: | chr21:11061628-11061767 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 102 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 225-652 |
Cow position: | chr21:34594427-34593985 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 297 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 13, 54 |
Conread position: | 237-729 |
Cow position: | chr21:18340835-18340317 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 332 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 7, 54 |
Conread position: | 246-727 |
Cow position: | chr21:44764317-44763818 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 28 |
Conread position: | 268-716 |
Cow position: | chr21:7591312-7591780 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 313 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 44, 191 |
Conread position: | 294-556 |
Cow position: | chr21:27150160-27150440 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 189 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 17, 178 |
Conread position: | 319-626 |
Cow position: | chr21:23651871-23652193 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 68 |
Conread position: | 331-602 |
Cow position: | chr21:23804131-23803846 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 192 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 94, 144 |
Show alignments to all cow chromosomes.