Cow genome map

Conread name: Ova1-OVRM10210C04

Conread position: 1-481
Cow position: chr21:21943195-21942711 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 50

Conread position: 1-726
Cow position: chr21:6625926-6626637 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 132

Conread position: 1-727
Cow position: chr21:5018529-5019278 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 155

Conread position: 1-727
Cow position: chr21:27284860-27285583 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 13

Conread position: 1-730
Cow position: chr21:29004141-29003386 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 125

Conread position: 2-422
Cow position: chr21:41404706-41405126 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 67, 9

Conread position: 3-274
Cow position: chr21:4185311-4185575 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 82

Conread position: 3-376
Cow position: chr21:2722457-2722823 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 123

Conread position: 3-700
Cow position: chr21:4712129-4712784 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 445
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 9, 32

Conread position: 3-712
Cow position: chr21:36979522-36978784 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 8

Conread position: 4-727
Cow position: chr21:2512241-2512985 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 4-727
Cow position: chr21:11507006-11507743 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-727
Cow position: chr21:26635762-26635021 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 44

Conread position: 4-727
Cow position: chr21:37372632-37373362 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 43

Conread position: 5-324
Cow position: chr21:42914755-42915076 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 126

Conread position: 5-726
Cow position: chr21:40080792-40081502 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 476
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 44

Conread position: 5-732
Cow position: chr21:43805139-43804404 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 43

Conread position: 9-465
Cow position: chr21:1286803-1286363 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 35

Conread position: 9-727
Cow position: chr21:47942346-47943082 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 146

Conread position: 12-729
Cow position: chr21:1075465-1076174 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 145

Conread position: 14-367
Cow position: chr21:12054613-12054262 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 19, 24

Conread position: 14-379
Cow position: chr21:34822808-34822443 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 114

Conread position: 14-727
Cow position: chr21:30598076-30597332 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 47

Conread position: 14-727
Cow position: chr21:47646733-47647469 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 16-727
Cow position: chr21:19612163-19612892 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 22

Conread position: 17-719
Cow position: chr21:3780177-3780902 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 44

Conread position: 21-367
Cow position: chr21:45782890-45783225 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 29, 23

Conread position: 23-379
Cow position: chr21:21520011-21520370 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 135

Conread position: 23-728
Cow position: chr21:147339-148057 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 38

Conread position: 24-519
Cow position: chr21:33253595-33254096 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 87

Conread position: 28-634
Cow position: chr21:405731-405124 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 398
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 112, 71

Conread position: 36-726
Cow position: chr21:13298026-13298713 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 26

Conread position: 50-726
Cow position: chr21:21024910-21025605 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 14

Conread position: 50-726
Cow position: chr21:31250454-31251126 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 48

Conread position: 51-369
Cow position: chr21:5839750-5839431 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 29, 45

Conread position: 51-715
Cow position: chr21:31639361-31640030 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 449
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 16, 47

Conread position: 52-721
Cow position: chr21:39426514-39427194 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 21

Conread position: 52-728
Cow position: chr21:2539642-2538936 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 100

Conread position: 53-307
Cow position: chr21:9865846-9865619 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 221, 18

Conread position: 56-721
Cow position: chr21:34655287-34655954 (view UCSC Genome Browser custom track)
Alignm length: 691
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 74

Conread position: 58-517
Cow position: chr21:38801886-38802350 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 14

Conread position: 70-624
Cow position: chr21:4588540-4587985 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 373
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 158, 49

Conread position: 78-647
Cow position: chr21:45491513-45492094 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 381
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 214, 45

Conread position: 86-721
Cow position: chr21:26566785-26566141 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 414
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 12, 85

Conread position: 90-729
Cow position: chr21:38805916-38805267 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 414
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 218, 19

Conread position: 102-629
Cow position: chr21:9893457-9894001 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 26

Conread position: 117-726
Cow position: chr21:997329-996706 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 69

Conread position: 147-630
Cow position: chr21:6414487-6413989 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 36

Conread position: 188-727
Cow position: chr21:33710723-33711269 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 294

Conread position: 205-344
Cow position: chr21:11061628-11061767 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 225-652
Cow position: chr21:34594427-34593985 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 297
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 13, 54

Conread position: 237-729
Cow position: chr21:18340835-18340317 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 332
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 54

Conread position: 246-727
Cow position: chr21:44764317-44763818 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 28

Conread position: 268-716
Cow position: chr21:7591312-7591780 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 313
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 44, 191

Conread position: 294-556
Cow position: chr21:27150160-27150440 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 178

Conread position: 319-626
Cow position: chr21:23651871-23652193 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 68

Conread position: 331-602
Cow position: chr21:23804131-23803846 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 144

Show alignments to all cow chromosomes.