Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-699 |
| Cow position: | chr22:39689705-39690380 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 443 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 1-721 |
| Cow position: | chr22:5936934-5936206 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 62 |
| Conread position: | 1-726 |
| Cow position: | chr22:30128807-30129543 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 1-726 |
| Cow position: | chr22:30146456-30147192 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 48 |
| Conread position: | 1-727 |
| Cow position: | chr22:19142468-19141726 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 2-471 |
| Cow position: | chr22:44606460-44606014 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 3-418 |
| Cow position: | chr22:45582139-45582544 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 290 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 3-726 |
| Cow position: | chr22:13547552-13546821 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 4-379 |
| Cow position: | chr22:24951778-24952153 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-414 |
| Cow position: | chr22:35906167-35905756 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 119 |
| Conread position: | 4-429 |
| Cow position: | chr22:12730464-12730048 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 57 |
| Conread position: | 4-517 |
| Cow position: | chr22:16202134-16202654 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-519 |
| Cow position: | chr22:21035166-21034651 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 119 |
| Conread position: | 4-667 |
| Cow position: | chr22:8737119-8736464 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 4-693 |
| Cow position: | chr22:316736-317415 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 77 |
| Conread position: | 4-694 |
| Cow position: | chr22:13773747-13774444 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 58 |
| Conread position: | 4-716 |
| Cow position: | chr22:3277136-3276401 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 124 |
| Conread position: | 4-721 |
| Cow position: | chr22:4242404-4241685 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 475 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 4-721 |
| Cow position: | chr22:15352103-15352821 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 104 |
| Conread position: | 4-727 |
| Cow position: | chr22:17327233-17326520 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 74 |
| Conread position: | 5-727 |
| Cow position: | chr22:44368253-44367517 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 32 |
| Conread position: | 7-727 |
| Cow position: | chr22:1880028-1880770 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 7-727 |
| Cow position: | chr22:44492279-44493013 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 9-261 |
| Cow position: | chr22:38550620-38550862 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 219, 48 |
| Conread position: | 9-276 |
| Cow position: | chr22:8120852-8120597 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 9-336 |
| Cow position: | chr22:6501909-6501591 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 157, 48 |
| Conread position: | 9-429 |
| Cow position: | chr22:3305369-3304957 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 53 |
| Conread position: | 9-712 |
| Cow position: | chr22:1268527-1267815 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 122 |
| Conread position: | 14-257 |
| Cow position: | chr22:19536784-19537025 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-379 |
| Cow position: | chr22:18815132-18814769 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 14-652 |
| Cow position: | chr22:27308543-27307899 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr22:694855-695583 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr22:11803820-11803090 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr22:18028519-18029234 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 142 |
| Conread position: | 14-727 |
| Cow position: | chr22:20239608-20238875 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr22:36860306-36859587 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 110 |
| Conread position: | 14-727 |
| Cow position: | chr22:37292442-37291712 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 141 |
| Conread position: | 14-734 |
| Cow position: | chr22:6021898-6022620 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 15-487 |
| Cow position: | chr22:37268400-37268877 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 313 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 54, 90 |
| Conread position: | 15-727 |
| Cow position: | chr22:35670431-35669706 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 100 |
| Conread position: | 16-729 |
| Cow position: | chr22:33351906-33352615 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 21-517 |
| Cow position: | chr22:21195255-21194755 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 40 |
| Conread position: | 21-729 |
| Cow position: | chr22:23800968-23800274 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 70 |
| Conread position: | 22-511 |
| Cow position: | chr22:6332951-6333446 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 23-727 |
| Cow position: | chr22:44935212-44935925 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 56 |
| Conread position: | 24-734 |
| Cow position: | chr22:296696-297417 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 96 |
| Conread position: | 27-727 |
| Cow position: | chr22:290452-289735 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 40-726 |
| Cow position: | chr22:8664699-8664036 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 447 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 42-353 |
| Cow position: | chr22:44366841-44366537 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 265, 53 |
| Conread position: | 50-720 |
| Cow position: | chr22:15852695-15853373 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 82 |
| Conread position: | 51-661 |
| Cow position: | chr22:29011991-29011381 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 32 |
| Conread position: | 52-424 |
| Cow position: | chr22:41241498-41241870 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 65 |
| Conread position: | 52-661 |
| Cow position: | chr22:44518359-44517749 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 65 |
| Conread position: | 52-726 |
| Cow position: | chr22:21590692-21591386 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 73 |
| Conread position: | 56-478 |
| Cow position: | chr22:3272824-3272383 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 81-727 |
| Cow position: | chr22:30677412-30676749 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 99-632 |
| Cow position: | chr22:14824382-14823836 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 358 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 112-729 |
| Cow position: | chr22:11807411-11806786 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 16 |
| Conread position: | 187-726 |
| Cow position: | chr22:1323558-1324114 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 188-519 |
| Cow position: | chr22:38960509-38960851 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 215-661 |
| Cow position: | chr22:32283252-32282786 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 261 |
| Conread position: | 221-379 |
| Cow position: | chr22:23509065-23508907 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 228-726 |
| Cow position: | chr22:29037117-29037620 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 251-667 |
| Cow position: | chr22:37141985-37142401 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 253-727 |
| Cow position: | chr22:29499008-29499505 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 229 |
| Conread position: | 328-640 |
| Cow position: | chr22:8880642-8880968 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 98, 146 |
| Conread position: | 328-727 |
| Cow position: | chr22:44459196-44459623 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 288 |
Show alignments to all cow chromosomes.