Cow genome map

Conread name: Ova1-OVRM10210C04

Conread position: 1-699
Cow position:
Alignm length: 712
Alignm identity: 443
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 10

Conread position: 1-721
Cow position:
Alignm length: 759
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 62

Conread position: 1-726
Cow position:
Alignm length: 757
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 48

Conread position: 1-726
Cow position:
Alignm length: 757
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 48

Conread position: 1-727
Cow position:
Alignm length: 762
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 13

Conread position: 2-471
Cow position:
Alignm length: 478
Alignm identity: 311
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 19

Conread position: 3-418
Cow position:
Alignm length: 427
Alignm identity: 290
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 11

Conread position: 3-726
Cow position:
Alignm length: 751
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 20

Conread position: 4-379
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-414
Cow position:
Alignm length: 416
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 119

Conread position: 4-429
Cow position:
Alignm length: 430
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 57

Conread position: 4-517
Cow position:
Alignm length: 527
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 4-519
Cow position:
Alignm length: 524
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 119

Conread position: 4-667
Cow position:
Alignm length: 688
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 4-693
Cow position:
Alignm length: 707
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 77

Conread position: 4-694
Cow position:
Alignm length: 717
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 58

Conread position: 4-716
Cow position:
Alignm length: 742
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 124

Conread position: 4-721
Cow position:
Alignm length: 751
Alignm identity: 475
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 7, 18

Conread position: 4-721
Cow position:
Alignm length: 736
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 104

Conread position: 4-727
Cow position:
Alignm length: 745
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 74

Conread position: 5-727
Cow position:
Alignm length: 748
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 32

Conread position: 7-727
Cow position:
Alignm length: 750
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 31

Conread position: 7-727
Cow position:
Alignm length: 749
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 31

Conread position: 9-261
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 219, 48

Conread position: 9-276
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 118, 0

Conread position: 9-336
Cow position:
Alignm length: 334
Alignm identity: 222
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 157, 48

Conread position: 9-429
Cow position:
Alignm length: 427
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 53

Conread position: 9-712
Cow position:
Alignm length: 735
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 122

Conread position: 14-257
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 19, 24

Conread position: 14-379
Cow position:
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 47

Conread position: 14-652
Cow position:
Alignm length: 656
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 745
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 741
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 734
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 142

Conread position: 14-727
Cow position:
Alignm length: 742
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 739
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 110

Conread position: 14-727
Cow position:
Alignm length: 741
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 141

Conread position: 14-734
Cow position:
Alignm length: 747
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 15-487
Cow position:
Alignm length: 486
Alignm identity: 313
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 90

Conread position: 15-727
Cow position:
Alignm length: 739
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 100

Conread position: 16-729
Cow position:
Alignm length: 734
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 21

Conread position: 21-517
Cow position:
Alignm length: 508
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 40

Conread position: 21-729
Cow position:
Alignm length: 724
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 70

Conread position: 22-511
Cow position:
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 23-727
Cow position:
Alignm length: 730
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 56

Conread position: 24-734
Cow position:
Alignm length: 740
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 96

Conread position: 27-727
Cow position:
Alignm length: 731
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 103

Conread position: 40-726
Cow position:
Alignm length: 704
Alignm identity: 447
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 67, 5

Conread position: 42-353
Cow position:
Alignm length: 314
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 265, 53

Conread position: 50-720
Cow position:
Alignm length: 694
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 82

Conread position: 51-661
Cow position:
Alignm length: 632
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 32

Conread position: 52-424
Cow position:
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 65

Conread position: 52-661
Cow position:
Alignm length: 634
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 65

Conread position: 52-726
Cow position:
Alignm length: 704
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 73

Conread position: 56-478
Cow position:
Alignm length: 451
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 81-727
Cow position:
Alignm length: 673
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 99-632
Cow position:
Alignm length: 560
Alignm identity: 358
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 24

Conread position: 112-729
Cow position:
Alignm length: 635
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 16

Conread position: 187-726
Cow position:
Alignm length: 566
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 188-519
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 215-661
Cow position:
Alignm length: 468
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 261

Conread position: 221-379
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 18

Conread position: 228-726
Cow position:
Alignm length: 517
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 17

Conread position: 251-667
Cow position:
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 59

Conread position: 253-727
Cow position:
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 229

Conread position: 328-640
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 98, 146

Conread position: 328-727
Cow position:
Alignm length: 430
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 288

Show alignments to all cow chromosomes.