Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-379 |
| Cow position: | chr23:29402502-29402138 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 1-727 |
| Cow position: | chr23:22146092-22145345 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 2-728 |
| Cow position: | chr23:7044959-7044250 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 98 |
| Conread position: | 3-228 |
| Cow position: | chr23:13510843-13511056 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 3-377 |
| Cow position: | chr23:21243521-21243147 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 3-557 |
| Cow position: | chr23:14263086-14263629 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 183 |
| Conread position: | 3-627 |
| Cow position: | chr23:2440040-2439430 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 414 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 3-726 |
| Cow position: | chr23:16054999-16055735 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 3-726 |
| Cow position: | chr23:31648803-31648090 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 3-734 |
| Cow position: | chr23:30237487-30238235 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 4-476 |
| Cow position: | chr23:16613958-16613502 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 127 |
| Conread position: | 4-698 |
| Cow position: | chr23:14972753-14972025 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 4-700 |
| Cow position: | chr23:19949369-19948674 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-726 |
| Cow position: | chr23:28218642-28219394 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-727 |
| Cow position: | chr23:1022739-1021998 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 141 |
| Conread position: | 4-734 |
| Cow position: | chr23:21822059-21821360 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 39 |
| Conread position: | 5-734 |
| Cow position: | chr23:15876347-15875605 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 9-727 |
| Cow position: | chr23:5873350-5872609 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 11-662 |
| Cow position: | chr23:28336764-28337407 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 403 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 122 |
| Conread position: | 12-353 |
| Cow position: | chr23:14777729-14777401 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 14-205 |
| Cow position: | chr23:14923067-14922878 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-426 |
| Cow position: | chr23:38691720-38692131 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 14-647 |
| Cow position: | chr23:41141998-41141349 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 19 |
| Conread position: | 14-727 |
| Cow position: | chr23:7314137-7314872 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr23:11714639-11713905 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 17-379 |
| Cow position: | chr23:2718545-2718905 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 17-727 |
| Cow position: | chr23:2759125-2759861 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 145 |
| Conread position: | 23-429 |
| Cow position: | chr23:8287197-8287582 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 36-566 |
| Cow position: | chr23:23172029-23172569 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 41-727 |
| Cow position: | chr23:19490816-19491511 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 17 |
| Conread position: | 64-730 |
| Cow position: | chr23:17878477-17877785 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 111-557 |
| Cow position: | chr23:14556132-14556592 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 295 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 125-591 |
| Cow position: | chr23:26838161-26838648 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 58 |
| Conread position: | 148-367 |
| Cow position: | chr23:6220509-6220728 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 168-727 |
| Cow position: | chr23:32351379-32350801 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 219-727 |
| Cow position: | chr23:608145-608673 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 254 |
| Conread position: | 304-726 |
| Cow position: | chr23:29478727-29479164 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 310-721 |
| Cow position: | chr23:23283047-23283484 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 405 |
| Conread position: | 328-647 |
| Cow position: | chr23:11074937-11074610 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 60 |
Show alignments to all cow chromosomes.