Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-248 |
| Cow position: | chr24:10222864-10222626 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 1-726 |
| Cow position: | chr24:36298741-36299455 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 1-728 |
| Cow position: | chr24:12150008-12149239 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 216 |
| Conread position: | 3-380 |
| Cow position: | chr24:11589249-11588864 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 57, 128 |
| Conread position: | 3-511 |
| Cow position: | chr24:6324044-6323529 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 3-726 |
| Cow position: | chr24:17300597-17299863 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 57 |
| Conread position: | 4-320 |
| Cow position: | chr24:25437602-25437900 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 169, 57 |
| Conread position: | 4-379 |
| Cow position: | chr24:6142391-6142751 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 136, 65 |
| Conread position: | 4-418 |
| Cow position: | chr24:19640985-19641436 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 52, 415 |
| Conread position: | 4-726 |
| Cow position: | chr24:9090744-9090012 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 86 |
| Conread position: | 14-326 |
| Cow position: | chr24:9187425-9187114 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-370 |
| Cow position: | chr24:12699507-12699151 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 14-379 |
| Cow position: | chr24:6435800-6436165 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-476 |
| Cow position: | chr24:5991908-5991439 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-720 |
| Cow position: | chr24:6130144-6130844 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 7 |
| Conread position: | 14-727 |
| Cow position: | chr24:7062859-7063588 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-727 |
| Cow position: | chr24:29188610-29189339 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 106 |
| Conread position: | 16-491 |
| Cow position: | chr24:44018827-44019310 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 112 |
| Conread position: | 16-727 |
| Cow position: | chr24:17322026-17322726 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 16-727 |
| Cow position: | chr24:38585799-38585085 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 21-332 |
| Cow position: | chr24:35840744-35840455 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 40 |
| Conread position: | 21-587 |
| Cow position: | chr24:38638855-38639434 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 40 |
| Conread position: | 21-590 |
| Cow position: | chr24:35869240-35868680 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 106 |
| Conread position: | 21-734 |
| Cow position: | chr24:14871003-14870270 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 114 |
| Conread position: | 22-249 |
| Cow position: | chr24:1450742-1450955 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 24-426 |
| Cow position: | chr24:310194-310597 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 104 |
| Conread position: | 27-320 |
| Cow position: | chr24:12163273-12163556 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 130 |
| Conread position: | 40-255 |
| Cow position: | chr24:14277866-14277661 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 52-544 |
| Cow position: | chr24:6023729-6023230 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 52-721 |
| Cow position: | chr24:6353493-6354178 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 75 |
| Conread position: | 56-379 |
| Cow position: | chr24:16083420-16083099 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 58-727 |
| Cow position: | chr24:13044263-13043578 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 14 |
| Conread position: | 86-661 |
| Cow position: | chr24:14755390-14755980 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 67 |
| Conread position: | 169-727 |
| Cow position: | chr24:6963277-6962700 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 14 |
| Conread position: | 186-524 |
| Cow position: | chr24:12569512-12569850 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 188-721 |
| Cow position: | chr24:36558062-36557525 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 96 |
| Conread position: | 190-691 |
| Cow position: | chr24:41003977-41004499 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 200 |
| Conread position: | 225-692 |
| Cow position: | chr24:17958020-17957516 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 47 |
| Conread position: | 263-721 |
| Cow position: | chr24:39405142-39404670 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 168, 17 |
| Conread position: | 311-712 |
| Cow position: | chr24:12163844-12164262 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 18, 230 |
Show alignments to all cow chromosomes.