Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-267 |
| Cow position: | chr28:34314226-34314482 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 1-718 |
| Cow position: | chr28:22232014-22231291 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 64 |
| Conread position: | 2-726 |
| Cow position: | chr28:1386133-1385401 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 118 |
| Conread position: | 3-331 |
| Cow position: | chr28:10460339-10460023 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 3-375 |
| Cow position: | chr28:13604024-13604396 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 129 |
| Conread position: | 3-454 |
| Cow position: | chr28:5803309-5803736 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 54 |
| Conread position: | 3-652 |
| Cow position: | chr28:15587357-15587995 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 93 |
| Conread position: | 4-363 |
| Cow position: | chr28:20896544-20896186 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 153 |
| Conread position: | 4-726 |
| Cow position: | chr28:8719690-8718956 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 124 |
| Conread position: | 4-726 |
| Cow position: | chr28:21360762-21361503 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 80 |
| Conread position: | 4-727 |
| Cow position: | chr28:5938754-5939491 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 141 |
| Conread position: | 4-727 |
| Cow position: | chr28:6778671-6777931 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 5-726 |
| Cow position: | chr28:17389667-17390412 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 153 |
| Conread position: | 5-727 |
| Cow position: | chr28:1954627-1955367 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 5-727 |
| Cow position: | chr28:24590123-24590865 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 124 |
| Conread position: | 9-317 |
| Cow position: | chr28:9337251-9336956 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 9-694 |
| Cow position: | chr28:15684733-15685454 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 52 |
| Conread position: | 14-379 |
| Cow position: | chr28:9179893-9180251 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-379 |
| Cow position: | chr28:22042007-22041644 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr28:484315-483584 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr28:1459371-1460105 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr28:2085739-2086471 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 144 |
| Conread position: | 14-727 |
| Cow position: | chr28:3190975-3190242 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 14-727 |
| Cow position: | chr28:22259871-22259144 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 103 |
| Conread position: | 16-727 |
| Cow position: | chr28:6537532-6536795 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 17-727 |
| Cow position: | chr28:783940-784672 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 17-727 |
| Cow position: | chr28:5750424-5749692 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 143 |
| Conread position: | 20-228 |
| Cow position: | chr28:14232650-14232432 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 177 |
| Conread position: | 21-478 |
| Cow position: | chr28:21566742-21567178 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 23-628 |
| Cow position: | chr28:12648389-12647788 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 401 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 39, 108 |
| Conread position: | 41-502 |
| Cow position: | chr28:8784627-8785087 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 330 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 55-323 |
| Cow position: | chr28:14752106-14752369 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 252, 70 |
| Conread position: | 64-587 |
| Cow position: | chr28:698614-699138 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 349 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 244, 13 |
| Conread position: | 77-621 |
| Cow position: | chr28:5814570-5815109 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 346 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 185-718 |
| Cow position: | chr28:11504791-11504240 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 191-471 |
| Cow position: | chr28:11489424-11489137 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 105 |
| Conread position: | 199-655 |
| Cow position: | chr28:9288409-9288880 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 88 |
| Conread position: | 203-460 |
| Cow position: | chr28:31850488-31850221 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 15 |
| Conread position: | 224-674 |
| Cow position: | chr28:7059180-7058714 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 263-721 |
| Cow position: | chr28:10495976-10495498 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 316 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 295-519 |
| Cow position: | chr28:9295799-9295570 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 304-727 |
| Cow position: | chr28:24884420-24884855 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 166 |
| Conread position: | 307-726 |
| Cow position: | chr28:1772959-1773381 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 123, 22 |
| Conread position: | 310-727 |
| Cow position: | chr28:31591130-31591567 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 165 |
Show alignments to all cow chromosomes.