Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-295 |
| Cow position: | chr29:251977-252252 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 6, 55 |
| Conread position: | 1-727 |
| Cow position: | chr29:31182633-31183376 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 2-727 |
| Cow position: | chr29:32287478-32288218 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 165 |
| Conread position: | 3-318 |
| Cow position: | chr29:12793463-12793764 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 115 |
| Conread position: | 3-446 |
| Cow position: | chr29:14084897-14084459 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 3-721 |
| Cow position: | chr29:15946581-15945853 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 3-727 |
| Cow position: | chr29:38207436-38206689 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 4-305 |
| Cow position: | chr29:21425781-21425493 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 52, 46 |
| Conread position: | 4-517 |
| Cow position: | chr29:36635154-36634633 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 4-693 |
| Cow position: | chr29:19953861-19954540 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 4-727 |
| Cow position: | chr29:13583314-13584055 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 122 |
| Conread position: | 4-727 |
| Cow position: | chr29:13622629-13621884 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 4-727 |
| Cow position: | chr29:40501767-40501040 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 4-728 |
| Cow position: | chr29:32892025-32892735 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 4-729 |
| Cow position: | chr29:647057-647784 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 58 |
| Conread position: | 5-727 |
| Cow position: | chr29:34798578-34797835 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 5-734 |
| Cow position: | chr29:609413-608669 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 115 |
| Conread position: | 7-650 |
| Cow position: | chr29:27180520-27179860 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 9-231 |
| Cow position: | chr29:21518127-21517910 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 59, 52 |
| Conread position: | 14-193 |
| Cow position: | chr29:35814730-35814549 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-316 |
| Cow position: | chr29:3328579-3328880 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-323 |
| Cow position: | chr29:42093005-42093313 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-325 |
| Cow position: | chr29:6198513-6198204 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-353 |
| Cow position: | chr29:18855705-18855366 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-517 |
| Cow position: | chr29:27979680-27979170 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-519 |
| Cow position: | chr29:45460987-45461499 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 14-726 |
| Cow position: | chr29:7845632-7846363 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr29:2840100-2839367 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 110 |
| Conread position: | 14-727 |
| Cow position: | chr29:21431612-21430881 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr29:25931285-25930545 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 14-727 |
| Cow position: | chr29:32558511-32557778 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 17-727 |
| Cow position: | chr29:20252415-20253142 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 44 |
| Conread position: | 21-727 |
| Cow position: | chr29:10023085-10022358 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 21-734 |
| Cow position: | chr29:4633372-4632668 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 37 |
| Conread position: | 22-379 |
| Cow position: | chr29:29503011-29502654 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 44-718 |
| Cow position: | chr29:13851601-13850919 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 111 |
| Conread position: | 49-721 |
| Cow position: | chr29:19888860-19889548 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 66-359 |
| Cow position: | chr29:4516859-4517145 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 67-707 |
| Cow position: | chr29:37165388-37166018 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 375 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 73, 103 |
| Conread position: | 75-727 |
| Cow position: | chr29:35298217-35298884 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 42 |
| Conread position: | 98-727 |
| Cow position: | chr29:43324850-43325488 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 55 |
| Conread position: | 112-414 |
| Cow position: | chr29:38619536-38619241 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 55 |
| Conread position: | 137-729 |
| Cow position: | chr29:19526921-19526310 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 48 |
| Conread position: | 153-726 |
| Cow position: | chr29:9641404-9640807 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 13 |
| Conread position: | 190-699 |
| Cow position: | chr29:2948963-2948428 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 352 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 270-650 |
| Cow position: | chr29:252455-252850 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 254 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 13, 202 |
| Conread position: | 337-694 |
| Cow position: | chr29:9082324-9081944 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 137 |
Show alignments to all cow chromosomes.