Cow genome map
| Conread name: | Ova1-OVRM10210C04 | 
| Conread position: | 1-348 | 
| Cow position: | chr3:29338760-29338414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 12, 77 | 
| Conread position: | 1-379 | 
| Cow position: | chr3:3057953-3058334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 72, 23 | 
| Conread position: | 1-424 | 
| Cow position: | chr3:16899033-16898639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 42, 61 | 
| Conread position: | 1-521 | 
| Cow position: | chr3:67164433-67164957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 43 | 
| Conread position: | 1-646 | 
| Cow position: | chr3:19832774-19832119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 11 | 
| Conread position: | 1-650 | 
| Cow position: | chr3:2918614-2919273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 675 | 
| Alignm identity: | 469 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 8 | 
| Conread position: | 1-727 | 
| Cow position: | chr3:40339007-40338258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 759 | 
| Alignm identity: | 534 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 45 | 
| Conread position: | 2-357 | 
| Cow position: | chr3:11541919-11542263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 49, 38 | 
| Conread position: | 2-676 | 
| Cow position: | chr3:55892558-55893210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 32 | 
| Conread position: | 3-275 | 
| Cow position: | chr3:55486145-55486409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 10, 94 | 
| Conread position: | 3-330 | 
| Cow position: | chr3:46922606-46922293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 9, 59 | 
| Conread position: | 3-429 | 
| Cow position: | chr3:52653503-52653092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 104 | 
| Conread position: | 3-519 | 
| Cow position: | chr3:58948686-58949196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 26 | 
| Conread position: | 3-716 | 
| Cow position: | chr3:53516747-53517488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 754 | 
| Alignm identity: | 520 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 50 | 
| Conread position: | 4-267 | 
| Cow position: | chr3:70888286-70888539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 69, 40 | 
| Conread position: | 4-414 | 
| Cow position: | chr3:63002398-63002006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 50, 95 | 
| Conread position: | 4-478 | 
| Cow position: | chr3:18354858-18354405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 148, 57 | 
| Conread position: | 4-519 | 
| Cow position: | chr3:2854295-2853790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 526 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 122 | 
| Conread position: | 4-646 | 
| Cow position: | chr3:56100536-56099901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 78 | 
| Conread position: | 4-712 | 
| Cow position: | chr3:30617774-30617053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 735 | 
| Alignm identity: | 503 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 124 | 
| Conread position: | 4-726 | 
| Cow position: | chr3:38494388-38495127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 756 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 40 | 
| Conread position: | 4-727 | 
| Cow position: | chr3:7247684-7248421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 751 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 34 | 
| Conread position: | 4-727 | 
| Cow position: | chr3:19800026-19799293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 750 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 34 | 
| Conread position: | 4-727 | 
| Cow position: | chr3:68698827-68698086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 752 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 34 | 
| Conread position: | 4-727 | 
| Cow position: | chr3:68872609-68871867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 752 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 34 | 
| Conread position: | 4-728 | 
| Cow position: | chr3:6783514-6784256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 750 | 
| Alignm identity: | 520 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 90 | 
| Conread position: | 5-587 | 
| Cow position: | chr3:60263873-60263276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 610 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 15, 94 | 
| Conread position: | 5-715 | 
| Cow position: | chr3:16887737-16887025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 738 | 
| Alignm identity: | 478 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 93 | 
| Conread position: | 5-726 | 
| Cow position: | chr3:32621893-32621157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 750 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 149 | 
| Conread position: | 7-556 | 
| Cow position: | chr3:20382177-20382745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 31 | 
| Conread position: | 9-726 | 
| Cow position: | chr3:3840358-3839637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 740 | 
| Alignm identity: | 522 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 125 | 
| Conread position: | 9-726 | 
| Cow position: | chr3:6686955-6687683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 752 | 
| Alignm identity: | 519 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 35 | 
| Conread position: | 12-379 | 
| Cow position: | chr3:65208059-65207702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 128, 34 | 
| Conread position: | 14-498 | 
| Cow position: | chr3:51364630-51364141 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 14-519 | 
| Cow position: | chr3:31416176-31416685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 117 | 
| Conread position: | 14-541 | 
| Cow position: | chr3:45033898-45034434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 14-560 | 
| Cow position: | chr3:64016214-64015669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 178 | 
| Conread position: | 14-647 | 
| Cow position: | chr3:3524180-3524816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 14-661 | 
| Cow position: | chr3:2368181-2367534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 665 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 14-726 | 
| Cow position: | chr3:63241081-63240352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 742 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 205, 58 | 
| Conread position: | 14-726 | 
| Cow position: | chr3:72671368-72670668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 728 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 51 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:2709712-2708980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 742 | 
| Alignm identity: | 522 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 142 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:4287245-4287974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 742 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 106 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:19879802-19880533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 743 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 50 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:27919583-27920296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 735 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:29330133-29329400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 741 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:34506187-34505463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 741 | 
| Alignm identity: | 505 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 96 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:41209446-41208723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 739 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:46860134-46859404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 740 | 
| Alignm identity: | 498 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 114 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:56295344-56296075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 741 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 25 | 
| Conread position: | 14-727 | 
| Cow position: | chr3:64026979-64026248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 742 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 141 | 
| Conread position: | 14-728 | 
| Cow position: | chr3:30330964-30330253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 734 | 
| Alignm identity: | 509 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 24 | 
| Conread position: | 14-728 | 
| Cow position: | chr3:49136413-49135674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 749 | 
| Alignm identity: | 535 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 47 | 
| Conread position: | 15-727 | 
| Cow position: | chr3:36863301-36862567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 742 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 23 | 
| Conread position: | 16-326 | 
| Cow position: | chr3:34198043-34198339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 203, 7 | 
| Conread position: | 16-379 | 
| Cow position: | chr3:47080252-47079889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 22 | 
| Conread position: | 16-727 | 
| Cow position: | chr3:2869946-2870678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 742 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 22 | 
| Conread position: | 16-727 | 
| Cow position: | chr3:29575966-29575231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 743 | 
| Alignm identity: | 500 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 139 | 
| Conread position: | 16-727 | 
| Cow position: | chr3:34029767-34029033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 742 | 
| Alignm identity: | 513 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 63 | 
| Conread position: | 17-723 | 
| Cow position: | chr3:595296-596012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 734 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 122 | 
| Conread position: | 19-723 | 
| Cow position: | chr3:37626145-37626859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 731 | 
| Alignm identity: | 512 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 9 | 
| Conread position: | 21-196 | 
| Cow position: | chr3:48229313-48229135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 44, 139 | 
| Conread position: | 21-377 | 
| Cow position: | chr3:64823267-64823623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 105 | 
| Conread position: | 21-379 | 
| Cow position: | chr3:15054521-15054199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 286, 40 | 
| Conread position: | 21-519 | 
| Cow position: | chr3:77424780-77425260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 45, 40 | 
| Conread position: | 21-726 | 
| Cow position: | chr3:29579787-29580495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 735 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 22 | 
| Conread position: | 25-690 | 
| Cow position: | chr3:56146471-56147156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 119 | 
| Conread position: | 26-544 | 
| Cow position: | chr3:1742499-1743029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 12 | 
| Conread position: | 28-727 | 
| Cow position: | chr3:23206700-23205986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 728 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 33 | 
| Conread position: | 31-727 | 
| Cow position: | chr3:56327286-56328007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 742 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 76 | 
| Conread position: | 40-263 | 
| Cow position: | chr3:27691856-27692066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 20, 7 | 
| Conread position: | 43-728 | 
| Cow position: | chr3:6495678-6496367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 65, 18 | 
| Conread position: | 44-727 | 
| Cow position: | chr3:66621390-66622100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 725 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 18 | 
| Conread position: | 49-303 | 
| Cow position: | chr3:2509849-2509599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 19, 12 | 
| Conread position: | 50-233 | 
| Cow position: | chr3:72783745-72783566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 6, 87 | 
| Conread position: | 50-494 | 
| Cow position: | chr3:18462638-18462202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 71 | 
| Conread position: | 54-302 | 
| Cow position: | chr3:56398385-56398620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 87, 69 | 
| Conread position: | 55-568 | 
| Cow position: | chr3:7313271-7312756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 82, 20 | 
| Conread position: | 55-726 | 
| Cow position: | chr3:19720456-19719770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 697 | 
| Alignm identity: | 490 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 271, 68 | 
| Conread position: | 64-277 | 
| Cow position: | chr3:40616635-40616429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 66-700 | 
| Cow position: | chr3:76380847-76380214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 276, 30 | 
| Conread position: | 66-729 | 
| Cow position: | chr3:79122388-79121717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 690 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 98 | 
| Conread position: | 91-673 | 
| Cow position: | chr3:84197057-84197663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 36 | 
| Conread position: | 100-721 | 
| Cow position: | chr3:62503371-62503991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 20 | 
| Conread position: | 111-718 | 
| Cow position: | chr3:27864437-27865051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 200, 10 | 
| Conread position: | 125-726 | 
| Cow position: | chr3:74851861-74851261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 62 | 
| Conread position: | 129-727 | 
| Cow position: | chr3:16224158-16224782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 178, 52 | 
| Conread position: | 136-414 | 
| Cow position: | chr3:73302551-73302816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 175, 16 | 
| Conread position: | 144-727 | 
| Cow position: | chr3:65208471-65209066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 39 | 
| Conread position: | 188-727 | 
| Cow position: | chr3:54291251-54290699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 45 | 
| Conread position: | 191-730 | 
| Cow position: | chr3:12566095-12565562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 40, 22 | 
| Conread position: | 197-726 | 
| Cow position: | chr3:19945581-19946135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 284 | 
| Conread position: | 264-692 | 
| Cow position: | chr3:51857287-51856840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 212 | 
| Conread position: | 301-727 | 
| Cow position: | chr3:19940371-19940814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 169 | 
| Conread position: | 311-726 | 
| Cow position: | chr3:15188261-15188682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 435 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 18, 164 | 
| Conread position: | 325-727 | 
| Cow position: | chr3:58784689-58784266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 149 | 
Show alignments to all cow chromosomes.
