Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-429 |
| Cow position: | chr4:9847265-9846833 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 147 |
| Conread position: | 1-521 |
| Cow position: | chr4:47522304-47522822 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 122 |
| Conread position: | 1-550 |
| Cow position: | chr4:51265681-51266216 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 356 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 61, 103 |
| Conread position: | 1-593 |
| Cow position: | chr4:32393222-32393824 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 396 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 251, 15 |
| Conread position: | 1-718 |
| Cow position: | chr4:10093859-10094583 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 472 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 10, 14 |
| Conread position: | 1-721 |
| Cow position: | chr4:1049311-1048576 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 85 |
| Conread position: | 1-727 |
| Cow position: | chr4:9355326-9356071 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 39 |
| Conread position: | 1-727 |
| Cow position: | chr4:12240269-12239547 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 62 |
| Conread position: | 1-727 |
| Cow position: | chr4:33071873-33071147 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 3-208 |
| Cow position: | chr4:51019616-51019822 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 136 |
| Conread position: | 3-268 |
| Cow position: | chr4:14138992-14139251 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 3-335 |
| Cow position: | chr4:4178208-4178527 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 17 |
| Conread position: | 3-367 |
| Cow position: | chr4:27974508-27974858 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 3-418 |
| Cow position: | chr4:47486264-47486675 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 4-236 |
| Cow position: | chr4:44924580-44924358 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 119 |
| Conread position: | 4-265 |
| Cow position: | chr4:9647329-9647568 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 4-274 |
| Cow position: | chr4:52268826-52268562 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 4-379 |
| Cow position: | chr4:69521491-69521843 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 4-695 |
| Cow position: | chr4:356863-357565 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 57 |
| Conread position: | 4-699 |
| Cow position: | chr4:34178281-34177596 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 4-721 |
| Cow position: | chr4:530359-531105 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 57 |
| Conread position: | 4-726 |
| Cow position: | chr4:6206560-6207288 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 58 |
| Conread position: | 4-726 |
| Cow position: | chr4:60263205-60262474 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 133 |
| Conread position: | 4-727 |
| Cow position: | chr4:1929686-1928946 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 4-727 |
| Cow position: | chr4:3126759-3127504 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 4-727 |
| Cow position: | chr4:5443877-5443132 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chr4:19005356-19004638 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 45 |
| Conread position: | 4-727 |
| Cow position: | chr4:32213119-32213866 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 5-634 |
| Cow position: | chr4:22474301-22474916 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 125 |
| Conread position: | 5-727 |
| Cow position: | chr4:18337803-18338546 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 120 |
| Conread position: | 6-727 |
| Cow position: | chr4:160119-160850 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 55 |
| Conread position: | 7-727 |
| Cow position: | chr4:99258-98520 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 9-726 |
| Cow position: | chr4:41191643-41190944 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 121 |
| Conread position: | 14-705 |
| Cow position: | chr4:5881121-5881834 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr4:18423558-18422832 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr4:26876815-26876095 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 14-727 |
| Cow position: | chr4:43882069-43882801 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 14-727 |
| Cow position: | chr4:44780260-44779533 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 140 |
| Conread position: | 14-734 |
| Cow position: | chr4:41955725-41956462 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 14-734 |
| Cow position: | chr4:41959860-41960598 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 15-379 |
| Cow position: | chr4:45106426-45106790 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 21-233 |
| Cow position: | chr4:41428278-41428488 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 94 |
| Conread position: | 21-377 |
| Cow position: | chr4:39268184-39267844 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 131, 40 |
| Conread position: | 21-466 |
| Cow position: | chr4:20067752-20067307 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 313 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 34, 91 |
| Conread position: | 24-726 |
| Cow position: | chr4:13958147-13958856 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 24-727 |
| Cow position: | chr4:49716757-49717468 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 35 |
| Conread position: | 29-721 |
| Cow position: | chr4:6567358-6568066 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 36-516 |
| Cow position: | chr4:65665413-65664943 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 92 |
| Conread position: | 47-727 |
| Cow position: | chr4:6865507-6864815 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 50-728 |
| Cow position: | chr4:16060263-16060968 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 52-633 |
| Cow position: | chr4:22027440-22026862 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 58-731 |
| Cow position: | chr4:7708403-7709065 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 62-657 |
| Cow position: | chr4:33596543-33597136 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 395 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 65-379 |
| Cow position: | chr4:19252446-19252750 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 66-721 |
| Cow position: | chr4:17502317-17501644 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 59 |
| Conread position: | 68-727 |
| Cow position: | chr4:30472221-30472906 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 122 |
| Conread position: | 75-727 |
| Cow position: | chr4:14386844-14387509 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 77 |
| Conread position: | 78-727 |
| Cow position: | chr4:28653466-28652802 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 47 |
| Conread position: | 81-324 |
| Cow position: | chr4:61693485-61693252 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 157, 36 |
| Conread position: | 81-429 |
| Cow position: | chr4:13871012-13871343 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 87-557 |
| Cow position: | chr4:60627830-60627362 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 43 |
| Conread position: | 91-727 |
| Cow position: | chr4:604670-605309 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 11 |
| Conread position: | 91-734 |
| Cow position: | chr4:34221787-34222442 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 53 |
| Conread position: | 98-726 |
| Cow position: | chr4:67651245-67650610 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 399 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 74 |
| Conread position: | 112-727 |
| Cow position: | chr4:3356872-3356243 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 40 |
| Conread position: | 114-442 |
| Cow position: | chr4:54969777-54970092 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 121, 71 |
| Conread position: | 119-728 |
| Cow position: | chr4:65916335-65916944 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 161-618 |
| Cow position: | chr4:41978287-41977806 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 189-727 |
| Cow position: | chr4:18102526-18101969 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 447 |
| Conread position: | 194-734 |
| Cow position: | chr4:28832857-28833422 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 79 |
| Conread position: | 241-734 |
| Cow position: | chr4:44899472-44899970 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 85 |
| Conread position: | 245-593 |
| Cow position: | chr4:14139563-14139927 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 252-727 |
| Cow position: | chr4:827403-827901 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 224 |
| Conread position: | 257-517 |
| Cow position: | chr4:17244306-17244576 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 54, 219 |
| Conread position: | 294-719 |
| Cow position: | chr4:6267954-6267507 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 183 |
| Conread position: | 327-693 |
| Cow position: | chr4:68943293-68942917 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 337-700 |
| Cow position: | chr4:68837716-68837327 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 43, 62 |
Show alignments to all cow chromosomes.