Cow genome map

Conread name: Ova1-OVRM10210C04

Conread position: 1-414
Cow position:
Alignm length: 416
Alignm identity: 276
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 310, 56

Conread position: 1-717
Cow position:
Alignm length: 747
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 1-726
Cow position:
Alignm length: 758
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 39

Conread position: 1-727
Cow position:
Alignm length: 756
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 63

Conread position: 1-727
Cow position:
Alignm length: 752
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 78

Conread position: 3-284
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 11

Conread position: 3-598
Cow position:
Alignm length: 610
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 3-622
Cow position:
Alignm length: 640
Alignm identity: 398
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 9

Conread position: 3-646
Cow position:
Alignm length: 684
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 182

Conread position: 3-717
Cow position:
Alignm length: 732
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 36

Conread position: 3-726
Cow position:
Alignm length: 762
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 12

Conread position: 3-727
Cow position:
Alignm length: 754
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 156

Conread position: 4-333
Cow position:
Alignm length: 333
Alignm identity: 231
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 62, 124

Conread position: 4-379
Cow position:
Alignm length: 387
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 51, 126

Conread position: 4-421
Cow position:
Alignm length: 426
Alignm identity: 287
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 60, 116

Conread position: 4-617
Cow position:
Alignm length: 632
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 127

Conread position: 4-618
Cow position:
Alignm length: 627
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 57

Conread position: 4-628
Cow position:
Alignm length: 646
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 129

Conread position: 4-653
Cow position:
Alignm length: 672
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 179

Conread position: 4-653
Cow position:
Alignm length: 675
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 4-698
Cow position:
Alignm length: 715
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 119

Conread position: 4-717
Cow position:
Alignm length: 733
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 109

Conread position: 4-721
Cow position:
Alignm length: 747
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 126

Conread position: 4-726
Cow position:
Alignm length: 756
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 4-726
Cow position:
Alignm length: 746
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 126

Conread position: 4-726
Cow position:
Alignm length: 746
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 15

Conread position: 4-727
Cow position:
Alignm length: 759
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 157

Conread position: 4-727
Cow position:
Alignm length: 750
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 4-727
Cow position:
Alignm length: 753
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 5-348
Cow position:
Alignm length: 345
Alignm identity: 227
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 28

Conread position: 5-429
Cow position:
Alignm length: 429
Alignm identity: 284
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 56

Conread position: 5-617
Cow position:
Alignm length: 627
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 179

Conread position: 6-729
Cow position:
Alignm length: 738
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 9

Conread position: 7-379
Cow position:
Alignm length: 378
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 31

Conread position: 9-269
Cow position:
Alignm length: 274
Alignm identity: 188
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 188

Conread position: 9-619
Cow position:
Alignm length: 626
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 5

Conread position: 9-661
Cow position:
Alignm length: 677
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 148

Conread position: 12-631
Cow position:
Alignm length: 638
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 105

Conread position: 14-379
Cow position:
Alignm length: 372
Alignm identity: 253
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 77

Conread position: 14-414
Cow position:
Alignm length: 407
Alignm identity: 275
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 19, 24

Conread position: 14-517
Cow position:
Alignm length: 519
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-541
Cow position:
Alignm length: 544
Alignm identity: 331
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 19, 24

Conread position: 14-674
Cow position:
Alignm length: 686
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-726
Cow position:
Alignm length: 740
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 85

Conread position: 14-727
Cow position:
Alignm length: 743
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 742
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 746
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 742
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-727
Cow position:
Alignm length: 741
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 38

Conread position: 14-728
Cow position:
Alignm length: 748
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 14-729
Cow position:
Alignm length: 745
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 24

Conread position: 15-727
Cow position:
Alignm length: 739
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 23

Conread position: 17-726
Cow position:
Alignm length: 727
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 110

Conread position: 21-379
Cow position:
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 111

Conread position: 21-697
Cow position:
Alignm length: 699
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 48

Conread position: 21-717
Cow position:
Alignm length: 735
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 24

Conread position: 22-727
Cow position:
Alignm length: 728
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 74

Conread position: 26-700
Cow position:
Alignm length: 707
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 18

Conread position: 36-633
Cow position:
Alignm length: 625
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 95

Conread position: 36-734
Cow position:
Alignm length: 729
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 7

Conread position: 41-379
Cow position:
Alignm length: 342
Alignm identity: 230
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 103

Conread position: 48-269
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 24

Conread position: 48-719
Cow position:
Alignm length: 694
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 68

Conread position: 50-723
Cow position:
Alignm length: 708
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 19

Conread position: 52-645
Cow position:
Alignm length: 620
Alignm identity: 397
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 176, 39

Conread position: 52-730
Cow position:
Alignm length: 693
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 60

Conread position: 55-617
Cow position:
Alignm length: 584
Alignm identity: 365
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 188, 60

Conread position: 55-727
Cow position:
Alignm length: 692
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 23

Conread position: 112-566
Cow position:
Alignm length: 462
Alignm identity: 298
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 194, 39

Conread position: 114-728
Cow position:
Alignm length: 639
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 69

Conread position: 147-652
Cow position:
Alignm length: 527
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 38

Conread position: 148-694
Cow position:
Alignm length: 589
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 46

Conread position: 157-426
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 151, 28

Conread position: 168-517
Cow position:
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 17

Conread position: 172-368
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 135, 11

Conread position: 189-727
Cow position:
Alignm length: 563
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 159

Conread position: 199-727
Cow position:
Alignm length: 557
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 278

Conread position: 220-589
Cow position:
Alignm length: 390
Alignm identity: 256
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 91, 13

Conread position: 224-727
Cow position:
Alignm length: 524
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 52

Conread position: 229-727
Cow position:
Alignm length: 522
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 373

Conread position: 246-727
Cow position:
Alignm length: 506
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 230

Conread position: 263-596
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 276-517
Cow position:
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 200

Conread position: 284-726
Cow position:
Alignm length: 463
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 111

Conread position: 310-653
Cow position:
Alignm length: 353
Alignm identity: 241
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 71

Show alignments to all cow chromosomes.