Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-623
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 63
               

               Conread position:
               1-716
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 51
               

               Conread position:
               1-726
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 143
               

               Conread position:
               3-317
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               3-426
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               3-461
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 132
               

               Conread position:
               3-726
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 11
               

               Conread position:
               3-727
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               4-379
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               4-511
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               4-616
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               4-664
               

               Cow position:
               
               

               Alignm length:
               683
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 57
               

               Conread position:
               4-699
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 27
               

               Conread position:
               4-713
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               4-721
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 126
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 124
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 125
               

               Conread position:
               4-734
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               5-719
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 33
               

               Conread position:
               5-727
               

               Cow position:
               
               

               Alignm length:
               766
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 156
               

               Conread position:
               6-378
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               7-727
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               9-519
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               9-650
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 78
               

               Conread position:
               9-729
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 101
               

               Conread position:
               10-598
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               14-217
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-255
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-284
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               14-302
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-335
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-342
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-414
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-524
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               14-550
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-581
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-721
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 146
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               15-622
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 117
               

               Conread position:
               15-727
               

               Cow position:
               
               

               Alignm length:
               765
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 46
               

               Conread position:
               16-726
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 12
               

               Conread position:
               16-727
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               17-728
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 128
               

               Conread position:
               18-379
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 43
               

               Conread position:
               19-237
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               20-557
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 17
               

               Conread position:
               21-721
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 70
               

               Conread position:
               21-721
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 23
               

               Conread position:
               24-284
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               37-727
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               41-511
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 37
               

               Conread position:
               49-726
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 32
               

               Conread position:
               50-720
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 69
               

               Conread position:
               50-727
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 39
               

               Conread position:
               53-653
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               397
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               276, 56
               

               Conread position:
               78-695
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               90-285
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               91-557
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               321
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               31, 97
               

               Conread position:
               91-721
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 16
               

               Conread position:
               120-284
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               137-661
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 106
               

               Conread position:
               147-727
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 36
               

               Conread position:
               190-707
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 63
               

               Conread position:
               212-727
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               225-634
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               229-627
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               100, 53
               

               Conread position:
               231-587
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               246-647
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 144
               

               Conread position:
               251-727
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               296-727
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 180
               

               Conread position:
               329-566
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               67, 59
               
Show alignments to all cow chromosomes.