Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-305
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               1-507
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               1-726
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 141
               

               Conread position:
               3-274
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               109, 186
               

               Conread position:
               3-726
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 11
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               4-296
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               4-429
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               4-478
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 114
               

               Conread position:
               4-580
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 70
               

               Conread position:
               4-654
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 128
               

               Conread position:
               4-694
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 92
               

               Conread position:
               4-700
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 147
               

               Conread position:
               4-705
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 143
               

               Conread position:
               4-715
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 149
               

               Conread position:
               4-721
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 155
               

               Conread position:
               4-721
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 57
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 37
               

               Conread position:
               5-331
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               5-519
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 56
               

               Conread position:
               5-710
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 7
               

               Conread position:
               11-414
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               13-726
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 79
               

               Conread position:
               14-274
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               14-284
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               14-327
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               48, 91
               

               Conread position:
               14-512
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-517
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               14-618
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-621
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               14-641
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               14-721
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 114
               

               Conread position:
               14-723
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 102
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 106
               

               Conread position:
               14-732
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               16-271
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 7
               

               Conread position:
               16-426
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               286
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               16-426
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               173, 28
               

               Conread position:
               16-721
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               17-721
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 107
               

               Conread position:
               17-727
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               21-690
               

               Cow position:
               
               

               Alignm length:
               690
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 8
               

               Conread position:
               21-718
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               22-418
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 39
               

               Conread position:
               22-723
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 40
               

               Conread position:
               28-377
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 99
               

               Conread position:
               29-726
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 89
               

               Conread position:
               41-726
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               47-650
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               48-356
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               125, 47
               

               Conread position:
               52-677
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               414
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               70, 19
               

               Conread position:
               52-725
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 64
               

               Conread position:
               55-376
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               72-726
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 51
               

               Conread position:
               73-716
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 44
               

               Conread position:
               90-728
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 45
               

               Conread position:
               147-550
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 36
               

               Conread position:
               147-641
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 19
               

               Conread position:
               147-727
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 38
               

               Conread position:
               149-641
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 34
               

               Conread position:
               188-644
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 58
               

               Conread position:
               188-721
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               357
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               123, 191
               

               Conread position:
               189-734
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               229-718
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 56
               

               Conread position:
               236-727
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 236
               

               Conread position:
               243-721
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               255-728
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 105
               

               Conread position:
               296-566
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 179
               

               Conread position:
               327-727
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               328-655
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               102, 146
               

               Conread position:
               331-726
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               63, 55
               

               Conread position:
               337-674
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               362-734
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               33, 24
               
Show alignments to all cow chromosomes.