Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-305 |
| Cow position: | chr7:41845478-41845189 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 1-507 |
| Cow position: | chr7:18445470-18444966 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 1-726 |
| Cow position: | chr7:24934273-24933534 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 141 |
| Conread position: | 3-274 |
| Cow position: | chr7:30303231-30303498 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 109, 186 |
| Conread position: | 3-726 |
| Cow position: | chr7:67813786-67814508 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 11 |
| Conread position: | 4-270 |
| Cow position: | chr7:40320476-40320723 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 4-296 |
| Cow position: | chr7:541684-541407 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 4-429 |
| Cow position: | chr7:57563817-57563400 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 4-478 |
| Cow position: | chr7:41874987-41874526 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 114 |
| Conread position: | 4-580 |
| Cow position: | chr7:20211789-20211228 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 70 |
| Conread position: | 4-654 |
| Cow position: | chr7:33332845-33333508 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 128 |
| Conread position: | 4-694 |
| Cow position: | chr7:6771-7476 (view UCSC Genome Browser custom track) |
| Alignm length: | 722 |
| Alignm identity: | 535 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 4-700 |
| Cow position: | chr7:64350769-64351494 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 147 |
| Conread position: | 4-705 |
| Cow position: | chr7:1609358-1608629 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 143 |
| Conread position: | 4-715 |
| Cow position: | chr7:5261634-5260916 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 149 |
| Conread position: | 4-721 |
| Cow position: | chr7:29471748-29472476 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 155 |
| Conread position: | 4-721 |
| Cow position: | chr7:55041206-55040468 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 4-726 |
| Cow position: | chr7:33311666-33310924 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-726 |
| Cow position: | chr7:39097262-39096524 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 43 |
| Conread position: | 4-727 |
| Cow position: | chr7:444980-444237 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 4-727 |
| Cow position: | chr7:27101006-27100267 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 4-727 |
| Cow position: | chr7:48805157-48804412 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chr7:49829044-49828309 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 37 |
| Conread position: | 5-331 |
| Cow position: | chr7:61045938-61045619 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 5-519 |
| Cow position: | chr7:58994872-58995364 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 56 |
| Conread position: | 5-710 |
| Cow position: | chr7:42871430-42872151 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 7 |
| Conread position: | 11-414 |
| Cow position: | chr7:40124650-40125055 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 13-726 |
| Cow position: | chr7:59685104-59685827 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 79 |
| Conread position: | 14-274 |
| Cow position: | chr7:1452937-1453197 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 56, 47 |
| Conread position: | 14-284 |
| Cow position: | chr7:66036462-66036729 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-327 |
| Cow position: | chr7:66906016-66906329 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 48, 91 |
| Conread position: | 14-512 |
| Cow position: | chr7:20557033-20557539 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-517 |
| Cow position: | chr7:25440794-25441299 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 14-618 |
| Cow position: | chr7:20514492-20513877 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-621 |
| Cow position: | chr7:54649190-54649814 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-641 |
| Cow position: | chr7:6630007-6629368 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 14-721 |
| Cow position: | chr7:52763576-52764303 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 114 |
| Conread position: | 14-723 |
| Cow position: | chr7:45947845-45947132 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 102 |
| Conread position: | 14-727 |
| Cow position: | chr7:20060777-20061507 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr7:24807179-24806464 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 14-727 |
| Cow position: | chr7:62445853-62445128 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 14-732 |
| Cow position: | chr7:6721431-6722162 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 16-271 |
| Cow position: | chr7:59029725-59029971 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 16-426 |
| Cow position: | chr7:6647374-6646968 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 286 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 16-426 |
| Cow position: | chr7:25136148-25136548 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 173, 28 |
| Conread position: | 16-721 |
| Cow position: | chr7:1403187-1402494 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 17-721 |
| Cow position: | chr7:67800119-67800841 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 17-727 |
| Cow position: | chr7:27788245-27788978 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 21-690 |
| Cow position: | chr7:63949755-63949088 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 21-718 |
| Cow position: | chr7:20533247-20533981 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 22-418 |
| Cow position: | chr7:1371342-1370952 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 22-723 |
| Cow position: | chr7:34487216-34487933 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 40 |
| Conread position: | 28-377 |
| Cow position: | chr7:996056-996393 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 99 |
| Conread position: | 29-726 |
| Cow position: | chr7:67429879-67430574 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 89 |
| Conread position: | 41-726 |
| Cow position: | chr7:63387067-63387750 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 47-650 |
| Cow position: | chr7:31095944-31095321 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 48-356 |
| Cow position: | chr7:27474093-27474388 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 125, 47 |
| Conread position: | 52-677 |
| Cow position: | chr7:54581187-54581806 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 414 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 52-725 |
| Cow position: | chr7:47974967-47974277 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 55-376 |
| Cow position: | chr7:28567683-28567996 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 43, 78 |
| Conread position: | 72-726 |
| Cow position: | chr7:58337681-58337027 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 51 |
| Conread position: | 73-716 |
| Cow position: | chr7:21313270-21313917 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 44 |
| Conread position: | 90-728 |
| Cow position: | chr7:46747346-46748010 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 45 |
| Conread position: | 147-550 |
| Cow position: | chr7:23250045-23250458 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 36 |
| Conread position: | 147-641 |
| Cow position: | chr7:6627978-6627472 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 19 |
| Conread position: | 147-727 |
| Cow position: | chr7:11462714-11462111 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 38 |
| Conread position: | 149-641 |
| Cow position: | chr7:66070699-66070199 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 34 |
| Conread position: | 188-644 |
| Cow position: | chr7:30118022-30117555 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 58 |
| Conread position: | 188-721 |
| Cow position: | chr7:20369434-20368898 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 357 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 191 |
| Conread position: | 189-734 |
| Cow position: | chr7:68896118-68896674 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 229-718 |
| Cow position: | chr7:34416846-34416334 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 56 |
| Conread position: | 236-727 |
| Cow position: | chr7:8336873-8337387 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 236 |
| Conread position: | 243-721 |
| Cow position: | chr7:19266397-19265900 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 31 |
| Conread position: | 255-728 |
| Cow position: | chr7:30304406-30304860 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 105 |
| Conread position: | 296-566 |
| Cow position: | chr7:40201523-40201808 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 179 |
| Conread position: | 327-727 |
| Cow position: | chr7:66906847-66907270 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 328-655 |
| Cow position: | chr7:3121601-3121942 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 102, 146 |
| Conread position: | 331-726 |
| Cow position: | chr7:34736790-34737194 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 63, 55 |
| Conread position: | 337-674 |
| Cow position: | chr7:949155-949517 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 362-734 |
| Cow position: | chr7:18963119-18963502 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 264 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 33, 24 |
Show alignments to all cow chromosomes.