Cow genome map
| Conread name: | Ova1-OVRM10210C04 |
| Conread position: | 1-334 |
| Cow position: | chr8:42418966-42418642 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 6, 79 |
| Conread position: | 1-346 |
| Cow position: | chr8:27727172-27727515 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 1-426 |
| Cow position: | chr8:9736707-9737135 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 7, 101 |
| Conread position: | 1-426 |
| Cow position: | chr8:14631198-14630774 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 1-519 |
| Cow position: | chr8:45145843-45145315 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 63 |
| Conread position: | 1-632 |
| Cow position: | chr8:53427962-53428598 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 1-656 |
| Cow position: | chr8:6726514-6725856 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 61 |
| Conread position: | 1-721 |
| Cow position: | chr8:47075623-47076368 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 1-727 |
| Cow position: | chr8:2169055-2168310 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 137 |
| Conread position: | 1-727 |
| Cow position: | chr8:33325519-33326261 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 2-723 |
| Cow position: | chr8:41644208-41643478 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 42 |
| Conread position: | 3-335 |
| Cow position: | chr8:46949188-46949549 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 3-367 |
| Cow position: | chr8:37654392-37654029 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 3-379 |
| Cow position: | chr8:31984599-31984975 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 10 |
| Conread position: | 3-653 |
| Cow position: | chr8:37656089-37655424 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 3-691 |
| Cow position: | chr8:9539219-9538551 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 9 |
| Conread position: | 3-729 |
| Cow position: | chr8:34525749-34525032 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 4-256 |
| Cow position: | chr8:49697521-49697272 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 4-356 |
| Cow position: | chr8:51857452-51857785 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 304, 123 |
| Conread position: | 4-418 |
| Cow position: | chr8:55086005-55086407 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 41 |
| Conread position: | 4-437 |
| Cow position: | chr8:23135139-23134703 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 122 |
| Conread position: | 4-517 |
| Cow position: | chr8:50960131-50959626 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 34 |
| Conread position: | 4-727 |
| Cow position: | chr8:2887218-2887967 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 125 |
| Conread position: | 4-727 |
| Cow position: | chr8:10749829-10750557 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chr8:25523870-25524602 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 34 |
| Conread position: | 4-727 |
| Cow position: | chr8:25775188-25774437 (view UCSC Genome Browser custom track) |
| Alignm length: | 762 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 22 |
| Conread position: | 4-727 |
| Cow position: | chr8:32630566-32629823 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 4-734 |
| Cow position: | chr8:11803293-11804026 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 53 |
| Conread position: | 5-517 |
| Cow position: | chr8:37932562-37933083 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 34 |
| Conread position: | 6-429 |
| Cow position: | chr8:45691538-45691132 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 286 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 59, 6 |
| Conread position: | 14-277 |
| Cow position: | chr8:27579876-27580137 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-284 |
| Cow position: | chr8:1152821-1152546 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-334 |
| Cow position: | chr8:47454118-47453802 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-418 |
| Cow position: | chr8:28878494-28878890 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 114 |
| Conread position: | 14-700 |
| Cow position: | chr8:34349152-34349854 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-726 |
| Cow position: | chr8:42158515-42157833 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 474 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 7 |
| Conread position: | 14-727 |
| Cow position: | chr8:1347774-1347040 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 141 |
| Conread position: | 14-727 |
| Cow position: | chr8:10742179-10741436 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 14-727 |
| Cow position: | chr8:14256556-14257290 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 14-727 |
| Cow position: | chr8:22570828-22570094 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 16-727 |
| Cow position: | chr8:25377460-25378198 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 16-727 |
| Cow position: | chr8:32436603-32435866 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 17-519 |
| Cow position: | chr8:39194734-39194223 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 17-728 |
| Cow position: | chr8:47660836-47660110 (view UCSC Genome Browser custom track) |
| Alignm length: | 737 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 44 |
| Conread position: | 19-368 |
| Cow position: | chr8:32647995-32648324 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 20-329 |
| Cow position: | chr8:20135956-20135656 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 20-726 |
| Cow position: | chr8:25438028-25438736 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 100 |
| Conread position: | 21-665 |
| Cow position: | chr8:9061639-9062284 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 33 |
| Conread position: | 21-721 |
| Cow position: | chr8:21230564-21231285 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 41 |
| Conread position: | 21-721 |
| Cow position: | chr8:34109361-34110076 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 169 |
| Conread position: | 23-726 |
| Cow position: | chr8:76113-75414 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 37-517 |
| Cow position: | chr8:14255685-14256170 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 44-734 |
| Cow position: | chr8:18054246-18054938 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 25 |
| Conread position: | 49-266 |
| Cow position: | chr8:20355612-20355826 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 50-567 |
| Cow position: | chr8:56884055-56884562 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 15 |
| Conread position: | 50-727 |
| Cow position: | chr8:12450559-12451252 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 51-726 |
| Cow position: | chr8:42469193-42469879 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 51 |
| Conread position: | 52-693 |
| Cow position: | chr8:34269280-34269942 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 414 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 52, 91 |
| Conread position: | 58-727 |
| Cow position: | chr8:39819976-39820662 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 14 |
| Conread position: | 65-459 |
| Cow position: | chr8:9963974-9963601 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 33 |
| Conread position: | 74-700 |
| Cow position: | chr8:9639412-9640068 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 81-726 |
| Cow position: | chr8:47887390-47888053 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 89-665 |
| Cow position: | chr8:38576642-38576049 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 108 |
| Conread position: | 116-691 |
| Cow position: | chr8:18292398-18291819 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 372 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 133-721 |
| Cow position: | chr8:18210853-18210257 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 61 |
| Conread position: | 149-283 |
| Cow position: | chr8:20991553-20991683 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 168-727 |
| Cow position: | chr8:21250858-21251443 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 182-727 |
| Cow position: | chr8:51068355-51067787 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 294 |
| Conread position: | 216-515 |
| Cow position: | chr8:2386864-2387174 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 261 |
| Conread position: | 219-716 |
| Cow position: | chr8:12804461-12804962 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 278-503 |
| Cow position: | chr8:35213743-35213960 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 152 |
| Conread position: | 295-726 |
| Cow position: | chr8:29923596-29923135 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 39 |
| Conread position: | 310-674 |
| Cow position: | chr8:49856558-49856192 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 328-647 |
| Cow position: | chr8:49295259-49294931 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 328-721 |
| Cow position: | chr8:40891507-40891095 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 318 |
Show alignments to all cow chromosomes.