Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               6, 79
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               290
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               7, 101
               

               Conread position:
               1-426
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 63
               

               Conread position:
               1-632
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               1-656
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 61
               

               Conread position:
               1-721
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 137
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               2-723
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 42
               

               Conread position:
               3-335
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               3-379
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 10
               

               Conread position:
               3-653
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 11
               

               Conread position:
               3-691
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               3-729
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               4-356
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               304, 123
               

               Conread position:
               4-418
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 41
               

               Conread position:
               4-437
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               4-517
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 34
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               763
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 125
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               762
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 22
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               4-734
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 53
               

               Conread position:
               5-517
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               6-429
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               286
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               59, 6
               

               Conread position:
               14-277
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-284
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-334
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-418
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 114
               

               Conread position:
               14-700
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-726
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               474
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 141
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 150
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               16-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 20
               

               Conread position:
               16-727
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               17-519
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               17-728
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 44
               

               Conread position:
               19-368
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               20-329
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               20-726
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               21-665
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 33
               

               Conread position:
               21-721
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 41
               

               Conread position:
               21-721
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 169
               

               Conread position:
               23-726
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               37-517
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               44-734
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 25
               

               Conread position:
               49-266
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               50-567
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 15
               

               Conread position:
               50-727
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               51-726
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 51
               

               Conread position:
               52-693
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               414
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               58-727
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 14
               

               Conread position:
               65-459
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               74-700
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 28
               

               Conread position:
               81-726
               

               Cow position:
               
               

               Alignm length:
               675
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               89-665
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               116-691
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               372
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               133-721
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 61
               

               Conread position:
               149-283
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               168-727
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 15
               

               Conread position:
               182-727
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 294
               

               Conread position:
               216-515
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               19, 261
               

               Conread position:
               219-716
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 81
               

               Conread position:
               278-503
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 152
               

               Conread position:
               295-726
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               310-674
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               328-647
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               96, 58
               

               Conread position:
               328-721
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 318
               
Show alignments to all cow chromosomes.