Cow genome map


           Conread name:
           Ova1-OVRM10210C04
        

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               6, 114
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 162
               

               Conread position:
               1-418
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               355
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               236, 43
               

               Conread position:
               1-519
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 111
               

               Conread position:
               1-631
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               448
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               274, 10
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 154
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               1-727
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               2-639
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               3-328
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               3-534
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               3-624
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               389
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               241, 58
               

               Conread position:
               3-661
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 13
               

               Conread position:
               3-689
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 127
               

               Conread position:
               3-716
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               3-721
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               3-726
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 11
               

               Conread position:
               3-727
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               3-728
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               4-270
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               4-517
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               4-658
               

               Cow position:
               
               

               Alignm length:
               673
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               4-660
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 57
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 151
               

               Conread position:
               4-726
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 81
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 57
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 122
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 140
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               5-327
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               5-363
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 124
               

               Conread position:
               5-727
               

               Cow position:
               
               

               Alignm length:
               766
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 151
               

               Conread position:
               7-721
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               7-727
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               9-568
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 35
               

               Conread position:
               12-379
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               313, 46
               

               Conread position:
               14-288
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-606
               

               Cow position:
               
               

               Alignm length:
               617
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               14-661
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 112
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 48
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 105
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 24
               

               Conread position:
               14-727
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 112
               

               Conread position:
               17-418
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 126
               

               Conread position:
               17-671
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 113
               

               Conread position:
               21-327
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 106
               

               Conread position:
               21-366
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               21-429
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               21-641
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 23
               

               Conread position:
               23-593
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               23-726
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 38
               

               Conread position:
               50-640
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               52-271
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 71
               

               Conread position:
               52-726
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               255, 71
               

               Conread position:
               58-566
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 14
               

               Conread position:
               82-700
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               82-727
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 20
               

               Conread position:
               82-727
               

               Cow position:
               
               

               Alignm length:
               671
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               115-728
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 27
               

               Conread position:
               125-410
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               135-632
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               136-727
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 20
               

               Conread position:
               220-517
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               91, 256
               

               Conread position:
               246-519
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 28
               

               Conread position:
               246-700
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               308
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               247-459
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               148, 36
               

               Conread position:
               251-712
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               320
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               299-519
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 173
               

               Conread position:
               310-721
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               310-727
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               325-704
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               327-613
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 263
               

               Conread position:
               328-727
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 146
               
Show alignments to all cow chromosomes.